Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AL357075.1-201ENST00000404107 726 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 FTH1P15-201ENST00000406984 280 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 MIR548I3-201ENST00000408378 149 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 MIR548I1-201ENST00000408810 149 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 RNU4-47P-201ENST00000410876 114 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 AL445305.1-201ENST00000432577 575 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 AP000870.1-201ENST00000472927 406 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 AF186996.7-201ENST00000492781 209 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 RN7SL504P-201ENST00000494496 287 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 GZMAP1-201ENST00000503054 631 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.97□□□□□ -1.93
TIMP4Q99727 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.97□□□□□ -1.93
TIMP4Q99727 RNU6-1338P-201ENST00000516328 91 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 RNU6-1012P-201ENST00000516606 109 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 HIGD1AP1-201ENST00000550979 275 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 AL451007.1-201ENST00000595491 289 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 AL110115.1-201ENST00000614396 364 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TIMP4Q99727 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TIMP4Q99727 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.96□□□□□ -1.94
TIMP4Q99727 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 RNU1-70P-201ENST00000362618 164 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 RNU6-200P-201ENST00000364743 107 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 Y_RNA.541-201ENST00000384640 113 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 MIR888-201ENST00000401186 77 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 RNA5SP229-201ENST00000410809 99 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 AC074117.2-201ENST00000417130 397 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 EIF1AXP1-201ENST00000419267 435 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 AC099548.1-201ENST00000421443 426 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.96□□□□□ -1.94
TIMP4Q99727 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.96□□□□□ -1.94
TIMP4Q99727 MRPL42P6-201ENST00000486397 371 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 RPS27AP10-201ENST00000496103 208 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.96□□□□□ -1.94
TIMP4Q99727 AC012493.2-201ENST00000595083 291 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 AC099778.2-201ENST00000610904 211 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 RMST_6.1-201ENST00000611980 203 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 MIR6134-201ENST00000617606 109 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 AC091903.1-201ENST00000624322 454 ntBASIC2.96□□□□□ -1.94
TIMP4Q99727 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TIMP4Q99727 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.96□□□□□ -1.94
TIMP4Q99727 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TIMP4Q99727 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TIMP4Q99727 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TIMP4Q99727 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.95□□□□□ -1.94
TIMP4Q99727 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
TIMP4Q99727 MIR335-201ENST00000362173 94 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 RNU6-142P-201ENST00000384019 107 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 MIR153-2-201ENST00000385225 87 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 SNORA48.8-201ENST00000391324 134 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 AL591034.1-201ENST00000407447 340 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 RNU2-14P-201ENST00000411053 191 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 RPS15AP7-201ENST00000439294 405 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 AC115115.1-201ENST00000449927 248 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 RPL26P9-201ENST00000457466 433 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.95□□□□□ -1.94
TIMP4Q99727 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.95□□□□□ -1.94
TIMP4Q99727 HSPE1P4-201ENST00000550617 308 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 MIR5004-201ENST00000579078 107 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 AC019159.1-201ENST00000605094 187 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 uc_338.1-201ENST00000612113 180 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 SNORA50A-202ENST00000629536 136 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 ZNF826P-207ENST00000622273 1910 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 AL079305.1-201ENST00000623159 3008 ntBASIC2.95□□□□□ -1.94
TIMP4Q99727 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.95□□□□□ -1.94
TIMP4Q99727 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
TIMP4Q99727 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TIMP4Q99727 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.94□□□□□ -1.94
TIMP4Q99727 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.94□□□□□ -1.94
TIMP4Q99727 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TIMP4Q99727 RNA5SP361-201ENST00000362686 118 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 RNU6-1266P-201ENST00000362794 105 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 SNORD81.1-201ENST00000363064 77 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 SNORD32A-201ENST00000364805 84 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 Y_RNA.352-201ENST00000365439 102 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TIMP4Q99727 Y_RNA.462-201ENST00000384268 102 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 RNU6-318P-201ENST00000384283 103 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 RNU6-1035P-201ENST00000384477 107 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 RNU6-102P-201ENST00000384485 104 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 MIR487A-201ENST00000385009 80 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 MRPL35P1-201ENST00000404272 572 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.94□□□□□ -1.94
TIMP4Q99727 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.94□□□□□ -1.94
TIMP4Q99727 EIF1P2-201ENST00000428233 350 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 WARS2P1-201ENST00000429678 537 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.94□□□□□ -1.94
TIMP4Q99727 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.94□□□□□ -1.94
TIMP4Q99727 AC007969.2-201ENST00000441891 191 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 GPM6BP3-201ENST00000442797 145 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.94□□□□□ -1.94
TIMP4Q99727 AC012308.1-201ENST00000451232 178 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.94□□□□□ -1.94
TIMP4Q99727 RNA5SP310-201ENST00000459084 116 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.94□□□□□ -1.94
TIMP4Q99727 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.94□□□□□ -1.94
TIMP4Q99727 SNORA31.6-201ENST00000516241 130 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 CR383656.8-201ENST00000549046 145 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms