Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC019159.1-201ENST00000605094 187 ntBASIC3.68□□□□□ -1.82
CHAMP1Q96JM3 AC048347.1-201ENST00000624621 427 ntBASIC3.68□□□□□ -1.82
CHAMP1Q96JM3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.68□□□□□ -1.82
CHAMP1Q96JM3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHAMP1Q96JM3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.68□□□□□ -1.82
CHAMP1Q96JM3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 MIR449A-201ENST00000362113 91 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 U8.10-201ENST00000384260 133 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 SNORA1.3-201ENST00000384676 136 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 MIR32-201ENST00000384965 70 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 RPS4XP3-201ENST00000398541 413 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 AC005300.1-201ENST00000428401 373 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 SSXP4-201ENST00000451349 245 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 AC087477.1-201ENST00000465747 340 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 RPS26P21-201ENST00000475397 348 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 MED28P2-201ENST00000475771 317 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 RNU6-237P-201ENST00000515985 71 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 RNA5SP309-201ENST00000516670 106 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 AC006199.1-201ENST00000548728 219 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 AC009163.5-201ENST00000575421 637 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 MIR4300-201ENST00000581016 96 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 MIR4276-201ENST00000584832 70 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 MIR7106-201ENST00000612419 65 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 AC240442.1-201ENST00000616055 283 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 AC141273.2-201ENST00000618989 130 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 U6.104-201ENST00000637979 90 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 AC002546.1-201ENST00000588041 2504 ntBASIC3.67□□□□□ -1.82
CHAMP1Q96JM3 MTND5P6-201ENST00000422338 1798 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 RNU6-212P-201ENST00000362642 104 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 Y_RNA.439-201ENST00000384119 94 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 RNU6-622P-201ENST00000384272 103 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 RNU6-318P-201ENST00000384283 103 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 Y_RNA.477-201ENST00000384352 108 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 RNU6-843P-201ENST00000384454 104 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 Y_RNA.552-201ENST00000384665 112 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 MIR544A-201ENST00000384855 91 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 MIR181B1-201ENST00000385240 110 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 RNU1-139P-201ENST00000391307 165 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 MIR1261-201ENST00000408659 82 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 AL714022.1-201ENST00000439897 151 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 MTND4LP30-201ENST00000454092 297 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 CKS1BP7-201ENST00000522230 235 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 HMGN2P15-201ENST00000585707 270 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 AC073410.2-201ENST00000603240 332 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 YPEL5P2-201ENST00000605553 359 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 uc_338.25-201ENST00000613756 156 ntBASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHAMP1Q96JM3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CHAMP1Q96JM3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.65□□□□□ -1.82
CHAMP1Q96JM3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 SNORA80A-201ENST00000363922 136 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 AL079342.1-201ENST00000401460 267 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 RN7SKP111-201ENST00000410349 271 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 AC023141.4-201ENST00000412031 328 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 AC016700.2-201ENST00000446011 156 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 AL590664.1-201ENST00000448065 339 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 RN7SL330P-201ENST00000469709 307 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 AP000870.1-201ENST00000472927 406 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 PHBP14-201ENST00000512887 367 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 Y_RNA.673-201ENST00000516306 88 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 RN7SKP272-201ENST00000516988 232 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 AC027288.2-201ENST00000553028 243 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 RPL12P50-201ENST00000603116 116 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 LINC02555-201ENST00000563933 1951 ntBASIC3.65□□□□□ -1.83
CHAMP1Q96JM3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 MIR335-201ENST00000362173 94 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 RNU6-858P-201ENST00000362436 107 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 Y_RNA.143-201ENST00000363520 106 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 MIR153-2-201ENST00000385225 87 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 RN7SKP61-201ENST00000410642 295 ntBASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.64□□□□□ -1.83
CHAMP1Q96JM3 AC025750.2-201ENST00000442609 450 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms