Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC97Q96F63 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC97Q96F63 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC97Q96F63 SPRR2C-201ENST00000290702 219 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CCDC97Q96F63 RNU1-13P-201ENST00000384499 162 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 MIR554-201ENST00000384874 96 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC97Q96F63 RBMY2UP-201ENST00000453474 324 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 RNU6-155P-201ENST00000516347 100 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 RNU6-966P-201ENST00000516479 104 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 RNU5F-4P-201ENST00000516581 114 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 RNU6-586P-201ENST00000517265 104 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 MIR4429-201ENST00000580105 73 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 AC010620.2-201ENST00000600135 313 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 RNA5SP196-201ENST00000625967 102 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC97Q96F63 AC092593.1-201ENST00000515413 1815 ntBASIC4.28□□□□□ -1.72
CCDC97Q96F63 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC97Q96F63 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC97Q96F63 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC97Q96F63 Y_RNA.136-201ENST00000363444 102 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 Y_RNA.418-201ENST00000384029 102 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC97Q96F63 MIR1294-201ENST00000408503 142 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 RNA5SP317-201ENST00000410176 116 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 RNU2-54P-201ENST00000410299 190 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 RNA5SP311-201ENST00000411290 116 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 AC126124.2-201ENST00000413542 321 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 AC083906.5-201ENST00000503722 328 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 RNA5SP315-201ENST00000516340 116 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 RNU6-1098P-201ENST00000516772 96 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 RNA5SP312-201ENST00000517068 116 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC97Q96F63 AL360157.1-201ENST00000565962 87 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 MIR4286-201ENST00000580651 93 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 AL133393.1-201ENST00000603277 287 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 uc_338.13-201ENST00000618243 179 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 U7.8-201ENST00000619968 63 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 AC112484.5-201ENST00000624189 228 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 AC008873.1-201ENST00000625051 138 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCDC97Q96F63 AL049781.1-201ENST00000623195 3585 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 AC110774.1-201ENST00000623567 2018 ntBASIC4.27□□□□□ -1.73
CCDC97Q96F63 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC97Q96F63 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC97Q96F63 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CCDC97Q96F63 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC97Q96F63 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC97Q96F63 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC97Q96F63 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC97Q96F63 RNU6-944P-201ENST00000364023 107 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 RNA5SP22-201ENST00000365393 109 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 SNORA67.2-201ENST00000384300 149 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC97Q96F63 AL157831.1-201ENST00000426134 473 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 MTCO1P5-201ENST00000433573 344 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC97Q96F63 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC97Q96F63 RNA5SP519-201ENST00000516480 119 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC97Q96F63 AC100770.1-201ENST00000532310 322 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC97Q96F63 AC023043.3-201ENST00000593113 385 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 AC069294.1-201ENST00000608397 350 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 AL138721.1-201ENST00000616756 179 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 MIR8059-201ENST00000620427 81 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 AC140479.6-201ENST00000633535 357 ntBASIC4.26□□□□□ -1.73
CCDC97Q96F63 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CCDC97Q96F63 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC97Q96F63 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC97Q96F63 SNORA60-201ENST00000362396 134 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 Y_RNA.269-201ENST00000364685 89 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 RNU6-200P-201ENST00000364743 107 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 SNORD21-201ENST00000383953 95 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 SNORA11F-201ENST00000408237 128 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC97Q96F63 ABCF2P2-201ENST00000450549 296 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 AC091959.1-201ENST00000495857 238 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC97Q96F63 RNU6-138P-201ENST00000515952 107 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 MIR449C-201ENST00000516047 92 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 RNA5SP49-201ENST00000516450 115 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 MIR4643-201ENST00000577473 78 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 AC006130.2-201ENST00000586202 326 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 AC006380.1-201ENST00000603598 186 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CCDC97Q96F63 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC97Q96F63 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC97Q96F63 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC97Q96F63 AC080128.1-201ENST00000474389 1917 ntBASIC4.25□□□□□ -1.73
CCDC97Q96F63 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC97Q96F63 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC97Q96F63 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC97Q96F63 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CCDC97Q96F63 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC97Q96F63 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC97Q96F63 RNA5SP322-201ENST00000363617 119 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms