Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNU4-26P-201ENST00000410270 107 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AL590135.1-201ENST00000422215 156 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AL590556.1-201ENST00000423231 483 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AC019205.3-201ENST00000424573 156 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 MRPS10P2-201ENST00000431226 381 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AL645568.3-201ENST00000433683 316 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AC016700.2-201ENST00000446011 156 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 RNU7-66P-201ENST00000459469 62 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AC007547.1-201ENST00000462177 490 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AP001486.1-201ENST00000463339 476 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 RPS29P25-201ENST00000481709 171 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AC015911.1-201ENST00000495111 156 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 RNU6-323P-201ENST00000521915 107 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AC107953.1-201ENST00000522216 297 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 TRAV32-201ENST00000553993 340 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 MIR4529-201ENST00000578110 78 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 AL078605.1-201ENST00000603529 500 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.59□□□□□ -2.15
RPUSD4Q96CM3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
RPUSD4Q96CM3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 RNU6-254P-201ENST00000363377 107 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 RNU4-56P-201ENST00000364700 142 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 RNU6-234P-201ENST00000365229 104 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 RNU6-214P-201ENST00000384130 107 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.450-201ENST00000384198 113 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.516-201ENST00000384541 124 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.530-201ENST00000384587 101 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 RNA5SP118-201ENST00000410385 109 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 RNU4-53P-201ENST00000410828 140 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 RNA5SP489-201ENST00000410986 109 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 RNU6-373P-201ENST00000411247 98 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 U8.21-201ENST00000459536 136 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC107032.1-201ENST00000485945 480 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC145146.1-201ENST00000496370 254 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC114801.2-201ENST00000503825 781 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 ANXA2P1-201ENST00000505539 926 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 FAM206BP-201ENST00000510179 541 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC092436.3-201ENST00000511788 257 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC025465.4-201ENST00000513422 638 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 SNORA31.16-201ENST00000516773 139 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 RNU6-612P-201ENST00000516909 102 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC025423.5-201ENST00000550230 219 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 SNRPGP18-201ENST00000553000 214 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC074050.1-201ENST00000563247 211 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 MIR3923-201ENST00000579521 83 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AL031274.2-201ENST00000599419 203 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 RPL17P51-201ENST00000605218 238 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC068944.2-201ENST00000610373 403 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC090517.2-201ENST00000614966 680 ntBASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
RPUSD4Q96CM3 AC008555.8-201ENST00000623602 2168 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 SNORD113-7-201ENST00000363762 77 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.212-201ENST00000364177 102 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 MIR518A2-201ENST00000384966 87 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 ZNF885P-201ENST00000420174 1098 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 MTND2P29-201ENST00000438595 412 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 AC245102.2-201ENST00000448956 180 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 AC091874.1-201ENST00000511402 339 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 PTP4A1P4-201ENST00000512479 322 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 CYP4A27P-201ENST00000567218 190 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 AC078795.3-201ENST00000602913 472 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 Z98751.3-201ENST00000604447 521 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 RMST_3.1-201ENST00000611651 109 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.6-201ENST00000362350 114 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.99-201ENST00000363138 105 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.135-201ENST00000363439 95 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 RNU6-1090P-201ENST00000364065 94 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.554-201ENST00000384672 102 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 Y_RNA.573-201ENST00000384763 105 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 MIR450B-201ENST00000401182 78 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 MIR1262-201ENST00000408276 93 ntBASIC1.56□□□□□ -2.16
RPUSD4Q96CM3 MIR1294-201ENST00000408503 142 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms