Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AP001324.2-201ENST00000461163 319 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 RPS29P2-201ENST00000479278 136 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 AF186996.7-201ENST00000492781 209 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 RNA5SP385-201ENST00000515947 110 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 AC245166.1-201ENST00000521012 253 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 AC090617.3-201ENST00000573670 475 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 AL355297.3-201ENST00000604082 446 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 AL159153.1-201ENST00000619688 317 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 UCA1.1-201ENST00000620952 75 ntBASIC2.84□□□□□ -1.95
CTHRC1Q96CG8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.84□□□□□ -1.96
CTHRC1Q96CG8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 Z75746.1-201ENST00000440243 2080 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 MIR22-201ENST00000362190 85 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 RNU6-874P-201ENST00000362390 105 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 Y_RNA.176-201ENST00000363815 109 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 CD24P4-201ENST00000382840 243 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 SNORA51.11-201ENST00000384442 131 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 Y_RNA.551-201ENST00000384661 102 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 RPL21P3-201ENST00000395517 478 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 MIR1302-3-201ENST00000408128 138 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 HMGB3P2-201ENST00000411913 584 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 AC146507.2-201ENST00000460608 476 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 AC112771.1-201ENST00000463581 102 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 S100A11P2-201ENST00000467589 312 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 RPL27AP5-201ENST00000469428 449 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 AC008885.1-201ENST00000514930 301 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 RN7SKP282-201ENST00000516824 299 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 AL109809.4-201ENST00000603520 2185 ntBASIC2.83□□□□□ -1.96
CTHRC1Q96CG8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 RNU6-529P-201ENST00000363383 104 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 Y_RNA.144-201ENST00000363521 113 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 Y_RNA.149-201ENST00000363558 117 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 RNU6-137P-201ENST00000363680 108 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 RNU6-525P-201ENST00000363685 104 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 RNU6-463P-201ENST00000384340 107 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 MIR128-1-201ENST00000384921 82 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 SNORA26.3-201ENST00000391119 136 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 UBA52P6-201ENST00000399822 382 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 AL031121.1-201ENST00000406553 254 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 RNA5SP274-201ENST00000410484 108 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 AC009414.1-201ENST00000427200 443 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 USP9YP16-201ENST00000430287 407 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 UQCRHP3-201ENST00000451503 251 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 USP9YP23-201ENST00000455085 407 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 U8.20-201ENST00000459445 131 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 MTATP8P1-201ENST00000467115 207 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 AC090525.1-201ENST00000479116 478 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 RN7SKP43-201ENST00000516173 320 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 Y_RNA.715-201ENST00000517082 110 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 AP002404.1-201ENST00000532005 451 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 MIR3923-201ENST00000579521 83 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 AL390123.1-201ENST00000603216 237 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 AC073410.2-201ENST00000603240 332 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 PRR13P7-201ENST00000605538 430 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 AL021879.1-201ENST00000611756 288 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 SNORD98-201ENST00000636377 67 ntBASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.82□□□□□ -1.96
CTHRC1Q96CG8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 Y_RNA.153-201ENST00000363615 91 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 SNORA36A-201ENST00000384221 132 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 RNU6-196P-201ENST00000384315 107 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 U3.26-201ENST00000391236 204 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 RN7SKP123-201ENST00000410732 291 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 Z92545.1-201ENST00000411782 234 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 snoU13.14-201ENST00000459372 104 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 AC117440.1-201ENST00000474107 571 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 RN7SL283P-201ENST00000489055 303 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms