Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 RAC1P2-201ENST00000511164 579 ntBASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 RN7SKP18-201ENST00000516005 275 ntBASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 RNA5SP291-201ENST00000517222 105 ntBASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 AC109810.1-201ENST00000534066 224 ntBASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHKBP1Q8TBC3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 ASNSP1-201ENST00000518311 1939 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 Y_RNA.179-201ENST00000363844 90 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-801P-201ENST00000364087 105 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 RNA5SP235-201ENST00000365411 114 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-1144P-201ENST00000384247 104 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 Y_RNA.525-201ENST00000384570 113 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 Z98941.1-201ENST00000407764 100 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 RPL23AP83-201ENST00000434984 473 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 SNORA71B-202ENST00000439232 272 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 RNU7-107P-201ENST00000459121 61 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 RPL23AP14-201ENST00000468281 468 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 AC092991.1-201ENST00000477176 376 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 RN7SL293P-201ENST00000481765 281 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 HSPE1P4-201ENST00000550617 308 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 TRAV28-201ENST00000557548 323 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 LINC00933-203ENST00000559812 219 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 LARP7P3-201ENST00000579888 337 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 AC006504.1-201ENST00000562493 3666 ntBASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
SHKBP1Q8TBC3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 SNORD56.1-201ENST00000362913 68 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-1310P-201ENST00000384153 107 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 MIR626-201ENST00000385032 94 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 MIR34B-201ENST00000385076 84 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 HMGN2P8-201ENST00000391458 268 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 MIR1290-201ENST00000408735 78 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 RPS12P23-201ENST00000419579 400 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 RPL21P66-201ENST00000426566 466 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 RN7SL93P-201ENST00000463035 293 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 AC016632.1-201ENST00000503994 196 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 RN7SKP179-201ENST00000516126 217 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 RNA5SP208-201ENST00000516156 78 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 SNORA31.20-201ENST00000517111 133 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 AC115990.1-201ENST00000526957 301 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 AP001340.1-201ENST00000624405 217 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHKBP1Q8TBC3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHKBP1Q8TBC3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.9□□□□□ -1.78
SHKBP1Q8TBC3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHKBP1Q8TBC3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.9□□□□□ -1.78
SHKBP1Q8TBC3 AL592437.2-201ENST00000421655 2434 ntBASIC3.9□□□□□ -1.78
SHKBP1Q8TBC3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 RNU4-10P-201ENST00000364383 140 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 MIR3074-201ENST00000384885 81 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 RNU6-460P-201ENST00000391158 108 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 SNORA26.5-201ENST00000391215 123 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 AL512633.1-201ENST00000399931 655 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 RN7SKP61-201ENST00000410642 295 ntBASIC3.9□□□□□ -1.79
SHKBP1Q8TBC3 RPS26P42-201ENST00000413485 326 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms