Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 AC026403.1-201ENST00000518938 295 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 MIR5571-201ENST00000577998 113 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 AL138963.2-201ENST00000605137 226 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 MAPK10-253ENST00000641010 4072 ntBASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.39□□□□□ -1.71
NEDD1Q8NHV4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 RNU6-1131P-201ENST00000364955 107 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 U3.15-201ENST00000365398 212 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 SNORA36A-201ENST00000384221 132 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 RNA5SP424-201ENST00000390988 115 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 RNA5SP171-201ENST00000391071 115 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 AL512604.1-201ENST00000404812 257 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 RNA5SP239-201ENST00000410218 129 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 AC006028.1-201ENST00000438379 402 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 AL078601.1-201ENST00000444542 271 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 RPS27P1-201ENST00000450552 247 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 AP000705.1-201ENST00000454567 350 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 AC091153.1-201ENST00000466297 402 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 SNORA43.2-201ENST00000516652 128 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD1Q8NHV4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 RNA5SP502-201ENST00000362694 119 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 RNU6-527P-201ENST00000363425 104 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 SNORA72.4-201ENST00000384174 132 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 SNORA20B-201ENST00000384220 132 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 Y_RNA.521-201ENST00000384560 114 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 MIR514A1-201ENST00000385133 98 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 U3.40-201ENST00000408706 208 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 AC074117.2-201ENST00000417130 397 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 AC112220.1-201ENST00000434628 355 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 AL451050.1-201ENST00000450126 415 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 TRBV12-2-201ENST00000489763 344 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 RNU6-1198P-201ENST00000516904 67 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 RNA5SP143-201ENST00000516936 115 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 RNU2-12P-201ENST00000517216 168 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 AC016256.1-201ENST00000547971 354 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 AC133485.4-201ENST00000561835 220 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 AC138907.4-201ENST00000570107 226 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 Y_RNA.757-201ENST00000578934 114 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 MIR4496-201ENST00000635896 61 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 Z82209.1-201ENST00000422141 2135 ntBASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD1Q8NHV4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 AC018555.1-201ENST00000567548 1980 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 SNORA71.3-201ENST00000362582 128 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 SNORD114-19-201ENST00000363072 75 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 SNORD58C-201ENST00000365223 64 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 RNU6-573P-201ENST00000383938 106 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 Y_RNA.558-201ENST00000384685 113 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 MIR449B-201ENST00000384995 97 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 MIR548A1-201ENST00000385041 97 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 MIR670-201ENST00000390142 98 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 AL606845.1-201ENST00000404881 255 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 AL355497.1-201ENST00000406262 551 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 RNU6-554P-201ENST00000410466 106 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 AC096649.2-201ENST00000416186 393 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 RNU6-1061P-201ENST00000516530 99 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 MIR92B-201ENST00000607575 96 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 MIR6075-201ENST00000620782 95 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 SCARNA4-202ENST00000625402 129 ntBASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.36□□□□□ -1.71
NEDD1Q8NHV4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 RNU6-454P-201ENST00000364292 107 ntBASIC4.35□□□□□ -1.71
NEDD1Q8NHV4 Y_RNA.229-201ENST00000364347 113 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms