Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 AL133396.1-201ENST00000432048 687 ntBASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 FTH1P25-201ENST00000447665 469 ntBASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 AC073415.1-201ENST00000449240 153 ntBASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 HMGN2P23-201ENST00000456759 269 ntBASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 AC132942.1-201ENST00000486753 483 ntBASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 RNU6-295P-201ENST00000516901 104 ntBASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 AP000873.5-201ENST00000533906 236 ntBASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 AC109446.1-201ENST00000566172 220 ntBASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 Z69908.1-201ENST00000622603 247 ntBASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 AC005609.4-201ENST00000625071 447 ntBASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NUDCD3Q8IVD9 LINC02555-201ENST00000563933 1951 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 RNU4-56P-201ENST00000364700 142 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 Y_RNA.332-201ENST00000365271 113 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 Y_RNA.381-201ENST00000365666 102 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 RNU6-338P-201ENST00000383888 105 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 MIR1261-201ENST00000408659 82 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 AC073464.1-201ENST00000429823 534 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 snoU13.26-201ENST00000459452 105 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 CCDC34P1-201ENST00000507441 517 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 ATP5EP1-201ENST00000510257 156 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 AC010493.1-201ENST00000513479 292 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 Y_RNA.675-201ENST00000516389 149 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 MIR3198-2-201ENST00000577868 80 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 MIR3923-201ENST00000579521 83 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 MIR3941-201ENST00000582572 103 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 AC011494.1-201ENST00000596454 237 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 AC073648.5-201ENST00000603502 305 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 AP001836.1-201ENST00000604675 523 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 AL356157.2-201ENST00000605122 111 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 MIR6845-201ENST00000613182 61 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 AL450472.1-202ENST00000637286 180 ntBASIC1.51□□□□□ -2.17
NUDCD3Q8IVD9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AP000568.1-201ENST00000282964 442 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 CBX3P1-201ENST00000325243 554 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AC092268.1-201ENST00000342691 405 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 RNU5A-6P-201ENST00000384136 116 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 SNORA36A-201ENST00000384221 132 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 Y_RNA.504-201ENST00000384481 104 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 U8.13-201ENST00000390842 128 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 RNA5SP100-201ENST00000410903 110 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 RNA5SP59-201ENST00000410922 110 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 MTCO2P19-201ENST00000427513 598 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 VN1R108P-201ENST00000431580 830 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AC016632.1-201ENST00000503994 196 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AC005741.1-201ENST00000511094 432 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AC087441.2-201ENST00000529141 262 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AK6P1-201ENST00000540219 478 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AC090115.3-201ENST00000553218 849 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AC119751.7-201ENST00000600494 245 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 uc_338.34-201ENST00000617467 174 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 AL354950.2-201ENST00000617939 290 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
NUDCD3Q8IVD9 MIR424-201ENST00000362227 98 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 RNU6-1103P-201ENST00000384150 107 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 RNU6-378P-201ENST00000384324 107 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 RNU6-1158P-201ENST00000391167 107 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 MTCO3P41-201ENST00000414801 328 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 AC007098.1-201ENST00000420122 367 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 AL353193.1-201ENST00000421444 268 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 MTCO1P19-201ENST00000443487 500 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 snoU13.15-201ENST00000459407 104 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 AC130509.1-201ENST00000464158 433 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 AL163973.1-201ENST00000484753 577 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 AC098862.1-201ENST00000504991 413 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 AC116337.1-201ENST00000509680 687 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 AC004223.2-201ENST00000590309 544 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 Z98751.3-201ENST00000604447 521 ntBASIC1.49□□□□□ -2.17
NUDCD3Q8IVD9 BX248123.2-201ENST00000606318 124 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms