Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 RNU6-1205P-201ENST00000363625 106 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 RNU6-1180P-201ENST00000364935 107 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 RNU6-622P-201ENST00000384272 103 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 Y_RNA.521-201ENST00000384560 114 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 Y_RNA.572-201ENST00000384757 98 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 AL645939.1-201ENST00000453429 797 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 RNA5SP246-201ENST00000458909 119 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 AC146507.2-201ENST00000460608 476 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 RPS26P15-201ENST00000488067 348 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 RPS27AP10-201ENST00000496103 208 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 AC110768.1-201ENST00000509222 400 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.65□□□□□ -1.67
SH3RF1Q7Z6J0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 ZNF962P-201ENST00000443465 3140 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 RNU6-1048P-201ENST00000364054 107 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 SNORD115-30-201ENST00000364117 82 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 Y_RNA.341-201ENST00000365341 102 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 RNU6-728P-201ENST00000365375 104 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 RNU6-855P-201ENST00000410395 104 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 AL135790.2-201ENST00000437701 267 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 SCARNA8-201ENST00000515924 131 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 SNORA74D-201ENST00000516404 141 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 Vault.1-201ENST00000516474 102 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 AC096577.2-201ENST00000611455 153 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 MIR7151-201ENST00000617477 60 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 snoZ196.1-201ENST00000625269 89 ntBASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SH3RF1Q7Z6J0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 Y_RNA.116-201ENST00000363292 103 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 Y_RNA.456-201ENST00000384232 111 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 MIR491-201ENST00000384877 84 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 RNU6-1228P-201ENST00000391014 107 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 RPL21P17-201ENST00000397467 475 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 SNORA3C-201ENST00000408792 125 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 AIMP1P2-201ENST00000425294 312 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 AL591419.1-201ENST00000427423 339 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 HMGN2P10-201ENST00000448085 265 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 RPL31P61-201ENST00000496160 376 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 AIG1P1-201ENST00000503376 148 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 RNU7-143P-201ENST00000516781 65 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 ACA59.2-201ENST00000517061 156 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 AC105137.2-201ENST00000569073 466 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 AC009093.8-201ENST00000641769 292 ntBASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SH3RF1Q7Z6J0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 SNORD73B-201ENST00000364394 72 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 Y_RNA.368-201ENST00000365547 113 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 Y_RNA.495-201ENST00000384435 112 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 SNORA40.5-201ENST00000391061 128 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 CBX3P9-201ENST00000402326 552 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 AC004552.1-201ENST00000419089 348 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 AC006011.1-201ENST00000442758 349 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 HMGN2P21-201ENST00000447764 270 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 RPS27P1-201ENST00000450552 247 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 RPS26P3-201ENST00000470205 348 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 AC090543.2-201ENST00000483963 348 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 AC004057.1-201ENST00000485827 348 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 AC022655.2-201ENST00000577280 318 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 MIR4724-201ENST00000579485 89 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 AC019176.2-201ENST00000611579 315 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 U6.95-201ENST00000636931 70 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 AC068647.2-201ENST00000637380 353 ntBASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
SH3RF1Q7Z6J0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SH3RF1Q7Z6J0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms