Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AL606489.2-201ENST00000433886 234 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 AC007677.1-201ENST00000445757 515 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 MTCO2P18-201ENST00000457151 658 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 RNU7-63P-201ENST00000459054 62 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 RPS3AP17-201ENST00000472594 777 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 AC022447.4-201ENST00000504053 364 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 Y_RNA.675-201ENST00000516389 149 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 SNORA25.15-201ENST00000516487 89 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 AC115990.1-201ENST00000526957 301 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.73□□□□□ -2.13
ATL3Q6DD88 HULC.1-201ENST00000612720 240 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 MTND4P14-201ENST00000435799 1354 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 SNORD32B-201ENST00000364460 84 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 RNU6-1141P-201ENST00000364520 107 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 Y_RNA.381-201ENST00000365666 102 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
ATL3Q6DD88 MIR1304-201ENST00000408243 91 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 AC010975.2-201ENST00000427781 588 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.72□□□□□ -2.13
ATL3Q6DD88 HSPE1P21-201ENST00000438283 308 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 snoU13.23-201ENST00000458863 104 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 MTND2P33-201ENST00000506452 1031 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 MTND3P5-201ENST00000512798 333 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 SNORA40.12-201ENST00000516329 111 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 RNU6-548P-201ENST00000517083 115 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 MTND2P38-201ENST00000522536 667 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.72□□□□□ -2.13
ATL3Q6DD88 AP003034.1-201ENST00000534621 422 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.72□□□□□ -2.13
ATL3Q6DD88 MIR4713-201ENST00000582691 75 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 CYP2C61P-201ENST00000604072 290 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 AP001330.5-201ENST00000607176 411 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 AC004908.3-201ENST00000610248 625 ntBASIC1.72□□□□□ -2.13
ATL3Q6DD88 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ATL3Q6DD88 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
ATL3Q6DD88 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.72□□□□□ -2.13
ATL3Q6DD88 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
ATL3Q6DD88 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.14
ATL3Q6DD88 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
ATL3Q6DD88 AL356292.1-201ENST00000283110 373 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 Y_RNA.99-201ENST00000363138 105 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 RNU1-42P-201ENST00000364033 160 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 RNU6-1164P-201ENST00000364428 107 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.71□□□□□ -2.14
ATL3Q6DD88 RPL23AP95-201ENST00000426806 265 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 HMGN2P3-201ENST00000433603 273 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 HMGN2P5-201ENST00000436882 273 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.71□□□□□ -2.14
ATL3Q6DD88 MTND1P29-201ENST00000448112 647 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 AC027575.1-201ENST00000481064 460 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.71□□□□□ -2.14
ATL3Q6DD88 RNU6-965P-201ENST00000516721 96 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 AC104383.1-201ENST00000530297 370 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 AC103996.1-201ENST00000555468 102 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.71□□□□□ -2.14
ATL3Q6DD88 AC011494.1-201ENST00000596454 237 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 AL356157.2-201ENST00000605122 111 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 AL450472.1-202ENST00000637286 180 ntBASIC1.71□□□□□ -2.14
ATL3Q6DD88 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.71□□□□□ -2.14
ATL3Q6DD88 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
ATL3Q6DD88 MTND5P10-201ENST00000603719 1809 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ATL3Q6DD88 AP000560.1-201ENST00000624150 1937 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 RNU1-58P-201ENST00000362413 163 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 Y_RNA.51-201ENST00000362725 102 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 Y_RNA.296-201ENST00000364930 108 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 RNU6-827P-201ENST00000365553 106 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 RNU6-142P-201ENST00000384019 107 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 RNU11-3P-201ENST00000391111 133 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 RNU6-1245P-201ENST00000411130 106 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.7□□□□□ -2.14
ATL3Q6DD88 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.7□□□□□ -2.14
ATL3Q6DD88 AC078809.1-201ENST00000427601 140 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 USP9YP14-201ENST00000430663 563 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 AL133396.1-201ENST00000432048 687 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.7□□□□□ -2.14
ATL3Q6DD88 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.7□□□□□ -2.14
ATL3Q6DD88 Y_RNA.676-201ENST00000516393 96 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 MTND4P7-201ENST00000523876 130 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 AP001893.2-201ENST00000526949 202 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.7□□□□□ -2.14
ATL3Q6DD88 AC022254.1-201ENST00000567857 235 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 MTND1P15-201ENST00000579262 949 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 AC012507.3-201ENST00000603556 477 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 AC025754.2-201ENST00000606491 432 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 AL022345.1-201ENST00000607292 135 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 Z99129.1-201ENST00000612510 255 ntBASIC1.7□□□□□ -2.14
ATL3Q6DD88 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
ATL3Q6DD88 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
ATL3Q6DD88 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.69□□□□□ -2.14
ATL3Q6DD88 SNORA26.3-201ENST00000391119 136 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 RN7SKP61-201ENST00000410642 295 ntBASIC1.69□□□□□ -2.14
ATL3Q6DD88 RNU2-66P-201ENST00000410650 161 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms