Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 CEP170P1-201ENST00000502249 4587 ntBASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 MIR422A-201ENST00000362286 90 ntBASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 MIR329-1-201ENST00000385028 80 ntBASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 AC115990.1-201ENST00000526957 301 ntBASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 AL391261.3-201ENST00000557194 520 ntBASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 AC090897.2-201ENST00000581715 130 ntBASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 Y_RNA.464-201ENST00000384282 110 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 Y_RNA.569-201ENST00000384749 103 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 Y_RNA.570-201ENST00000384750 101 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 RNU4-47P-201ENST00000410876 114 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 AP001025.1-201ENST00000486139 332 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 RNU6-928P-201ENST00000516876 104 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 CBX3P4-201ENST00000538909 354 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 AC026333.2-201ENST00000542164 106 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 MIR4643-201ENST00000577473 78 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 Z83818.1-201ENST00000603584 150 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 AL359198.2-201ENST00000611836 194 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 AC058791.1-201ENST00000608412 3198 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 TNPO1P3-201ENST00000436471 2662 ntBASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
USPL1Q5W0Q7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 MIR411-201ENST00000362239 96 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 RNU6-1285P-201ENST00000363480 105 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 RNU6-270P-201ENST00000364131 105 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 RNU6-622P-201ENST00000384272 103 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 RPL39P29-201ENST00000447779 157 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 RNU7-120P-201ENST00000459334 63 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 SNRPGP7-201ENST00000469016 106 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 AC006445.2-201ENST00000510061 472 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 RNU6-581P-201ENST00000516214 105 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 RNU6-406P-201ENST00000516470 107 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 RNU7-110P-201ENST00000516891 62 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 ACA59.2-201ENST00000517061 156 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 AC006199.1-201ENST00000548728 219 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 AL162424.1-201ENST00000602325 221 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 AC022149.2-201ENST00000621061 203 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 MIR3199-2-201ENST00000636243 86 ntBASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
USPL1Q5W0Q7 AC002543.1-201ENST00000299783 1954 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 RNU6-626P-201ENST00000363354 107 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 Y_RNA.150-201ENST00000363562 102 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 RNU6-514P-201ENST00000384208 107 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 RNU6-1001P-201ENST00000411265 100 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 AC012306.1-201ENST00000423267 114 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 AC025750.2-201ENST00000442609 450 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 RNA5SP310-201ENST00000459084 116 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 SNORA25.14-201ENST00000516481 132 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 AL356575.1-201ENST00000603008 283 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 MIR6076-201ENST00000617521 113 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 AC002546.1-201ENST00000588041 2504 ntBASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.23□□□□□ -1.73
USPL1Q5W0Q7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 SNORA25.1-201ENST00000362326 128 ntBASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 SNORA44-201ENST00000384584 132 ntBASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 AL591034.1-201ENST00000407447 340 ntBASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 Y_RNA.595-201ENST00000410403 105 ntBASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 AC007395.1-201ENST00000451333 677 ntBASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 SNORD19.2-201ENST00000516978 73 ntBASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 UBL5P4-201ENST00000562584 236 ntBASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
USPL1Q5W0Q7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms