Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AP003465.2-201ENST00000602571 373 ntBASIC0.84□□□□□ -2.28
SNAPC4Q5SXM2 AL391001.1-201ENST00000602747 715 ntBASIC0.84□□□□□ -2.28
SNAPC4Q5SXM2 AC131235.4-201ENST00000609288 620 ntBASIC0.84□□□□□ -2.28
SNAPC4Q5SXM2 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.84□□□□□ -2.28
SNAPC4Q5SXM2 RNU1-124P-201ENST00000363861 145 ntBASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 SNORD114-15-201ENST00000364687 72 ntBASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 RPS3AP36-201ENST00000398190 775 ntBASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 AC119751.4-201ENST00000507498 357 ntBASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 AC136932.1-201ENST00000574771 208 ntBASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 AL136363.2-201ENST00000604173 851 ntBASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 AC004492.1-201ENST00000607036 742 ntBASIC0.83□□□□□ -2.28
SNAPC4Q5SXM2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 RNU6-438P-201ENST00000365561 103 ntBASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 SNORA75B-201ENST00000384053 137 ntBASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 SNORA25-201ENST00000384384 134 ntBASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 PIGPP2-201ENST00000411569 458 ntBASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 AC006366.1-201ENST00000422002 759 ntBASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 RNU5F-2P-201ENST00000516066 82 ntBASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 CENPUP1-201ENST00000526649 1202 ntBASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 BX284668.6-201ENST00000606899 438 ntBASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 AC072039.2-201ENST00000608883 439 ntBASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 AC126544.2-201ENST00000625174 749 ntBASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SNAPC4Q5SXM2 RNA5SP299-201ENST00000391203 116 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 AL022718.1-201ENST00000412004 84 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 RPL23AP30-201ENST00000432419 501 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 AL591043.1-201ENST00000432461 424 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 AC245047.4-201ENST00000433189 144 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 AC114982.1-201ENST00000469402 321 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 AL512310.8-201ENST00000550183 120 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 MIR3146-201ENST00000580367 79 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 MIR4661-201ENST00000582720 75 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 AL359547.2-201ENST00000615810 418 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 AC068787.1-201ENST00000623908 691 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 MIR5087-201ENST00000635826 76 ntBASIC0.81□□□□□ -2.28
SNAPC4Q5SXM2 RNU6-1019P-201ENST00000364424 107 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 RNU6-413P-201ENST00000384115 107 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 MTCO3P41-201ENST00000414801 328 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 Y_RNA.687-201ENST00000516558 91 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 AC084824.5-201ENST00000612009 413 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 AC092809.3-201ENST00000415453 231 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 AC013410.2-201ENST00000422627 201 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 HMGN2P9-201ENST00000476875 229 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 RN7SKP88-201ENST00000516847 250 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 AC115990.1-201ENST00000526957 301 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 AC015688.6-201ENST00000577737 104 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 MIR544B-201ENST00000582372 78 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 AC018889.1-201ENST00000605372 397 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 AL022345.2-201ENST00000606307 135 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 7SK.8-201ENST00000612110 250 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 7SK.11-201ENST00000615477 250 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 7SK.13-201ENST00000622040 250 ntBASIC0.8□□□□□ -2.28
SNAPC4Q5SXM2 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
SNAPC4Q5SXM2 MIR544A-201ENST00000384855 91 ntBASIC0.79□□□□□ -2.28
SNAPC4Q5SXM2 MIR329-1-201ENST00000385028 80 ntBASIC0.79□□□□□ -2.28
SNAPC4Q5SXM2 MIR92A1-201ENST00000385233 78 ntBASIC0.79□□□□□ -2.28
SNAPC4Q5SXM2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.79□□□□□ -2.28
SNAPC4Q5SXM2 RPS25P9-201ENST00000435591 252 ntBASIC0.79□□□□□ -2.28
SNAPC4Q5SXM2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.79□□□□□ -2.28
SNAPC4Q5SXM2 MTND3P5-201ENST00000512798 333 ntBASIC0.79□□□□□ -2.28
SNAPC4Q5SXM2 AC091163.3-201ENST00000518269 1144 ntBASIC0.79□□□□□ -2.28
SNAPC4Q5SXM2 AC091135.1-201ENST00000585943 307 ntBASIC0.79□□□□□ -2.28
SNAPC4Q5SXM2 HMGN1P30-201ENST00000589286 268 ntBASIC0.79□□□□□ -2.28
SNAPC4Q5SXM2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 RNY4P3-201ENST00000365254 95 ntBASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 RNU6-1176P-201ENST00000390955 107 ntBASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 AC116353.3-201ENST00000511215 249 ntBASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 AC112206.3-201ENST00000514578 389 ntBASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 SCARNA16.2-201ENST00000516520 172 ntBASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 RNU6-1192P-201ENST00000612197 107 ntBASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 MIR6718-201ENST00000616153 80 ntBASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 RNU6-489P-201ENST00000618289 107 ntBASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 AC027335.2-201ENST00000624030 375 ntBASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 AL356596.1-201ENST00000624230 379 ntBASIC0.78□□□□□ -2.28
SNAPC4Q5SXM2 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
SNAPC4Q5SXM2 RNU6-862P-201ENST00000362804 105 ntBASIC0.77□□□□□ -2.29
SNAPC4Q5SXM2 RNU6-527P-201ENST00000363425 104 ntBASIC0.77□□□□□ -2.29
SNAPC4Q5SXM2 RNU6-723P-201ENST00000383973 107 ntBASIC0.77□□□□□ -2.29
SNAPC4Q5SXM2 RNU6-1179P-201ENST00000384667 107 ntBASIC0.77□□□□□ -2.29
SNAPC4Q5SXM2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.77□□□□□ -2.29
SNAPC4Q5SXM2 AL117351.1-201ENST00000438864 766 ntBASIC0.77□□□□□ -2.29
SNAPC4Q5SXM2 SNRPEP8-201ENST00000442866 260 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms