Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 AC010300.1-201ENST00000600671 5134 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 MIR302B-201ENST00000362188 73 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 Y_RNA.93-201ENST00000363066 109 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 RNU6-629P-201ENST00000384061 103 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 SNORA67.2-201ENST00000384300 149 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 U8.12-201ENST00000384701 133 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 MIR873-201ENST00000401120 77 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 MIR1193-201ENST00000408109 78 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 RPL23AP82-202ENST00000427528 469 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 AC011998.1-201ENST00000433403 117 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 RPL23AP7-203ENST00000449021 469 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 RPL23AP62-201ENST00000463396 453 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 AP000873.1-201ENST00000463987 400 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 CENPBD1P1-201ENST00000464061 469 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 AC091167.1-201ENST00000492017 396 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 SNORD77.4-201ENST00000516158 81 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 RNU6-1337P-201ENST00000516525 95 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 AP004371.1-201ENST00000525240 214 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 TRAV8-5-201ENST00000537369 341 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 MIR5009-201ENST00000578736 100 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 AL365205.2-201ENST00000594586 68 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 AC091979.2-201ENST00000607514 214 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 PCGEM1.1-201ENST00000613431 131 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 AC006133.1-201ENST00000617106 264 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 MIR6891-201ENST00000618788 93 ntBASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.05□□□□□ -1.76
RNFT1Q5M7Z0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 AC007256.1-201ENST00000392253 2765 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 MIR331-201ENST00000362302 94 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 RNU1-108P-201ENST00000362556 161 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 RNU1-132P-201ENST00000364300 164 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 RNU6-217P-201ENST00000384164 104 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 RNA5SP201-201ENST00000410316 124 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 AC027124.2-201ENST00000428249 105 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 HMGN2P21-201ENST00000447764 270 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 AC012671.1-201ENST00000451912 203 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 AC105137.1-201ENST00000484355 562 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 AC078817.1-201ENST00000492623 435 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 AC023141.12-201ENST00000512399 199 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 RN7SKP46-201ENST00000515942 234 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 RNA5SP236-201ENST00000516169 116 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 RNU6-904P-201ENST00000516206 101 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 MIR3160-1-201ENST00000577972 85 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 AC005972.2-201ENST00000604690 348 ntBASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RNFT1Q5M7Z0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 Y_RNA.124-201ENST00000363339 93 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 SNORD116-13-201ENST00000384408 92 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 AC002075.2-201ENST00000425207 252 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 SNORA31.9-201ENST00000516429 84 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 RNU6-126P-201ENST00000516685 103 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 RNA5SP490-201ENST00000517141 136 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 EIF4A1P12-201ENST00000551910 141 ntBASIC4.03□□□□□ -1.76
RNFT1Q5M7Z0 AC007224.1-201ENST00000564410 144 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms