Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AL157687.1-201ENST00000554853 619 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 TPRKBP2-201ENST00000565969 475 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.92□□□□□ -2.1
CDKL1Q00532 AC064807.4-201ENST00000607201 407 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 AC104458.1-201ENST00000608243 463 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.92□□□□□ -2.1
CDKL1Q00532 Y_RNA.783-201ENST00000613546 102 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CDKL1Q00532 FAM157A-202ENST00000615155 405 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 AL132822.1-201ENST00000617063 513 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CDKL1Q00532 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 MTND4P23-201ENST00000447723 1363 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 KPNA2P1-201ENST00000458289 1591 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 AC009541.1-201ENST00000438279 2662 ntBASIC1.92□□□□□ -2.1
CDKL1Q00532 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
CDKL1Q00532 RNA5SP276-201ENST00000362580 94 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 RNY3P3-201ENST00000363816 102 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 RNU6-1106P-201ENST00000390845 107 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 SNORA46.1-201ENST00000391069 153 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 BTF3L4P2-201ENST00000392798 346 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 EIF4E2P1-201ENST00000393781 255 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 MIR548F1-201ENST00000408667 84 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 RNU4-26P-201ENST00000410270 107 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 RNU2-40P-201ENST00000410833 196 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 USP9YP18-201ENST00000425912 695 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.91□□□□□ -2.1
CDKL1Q00532 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CDKL1Q00532 GPM6BP3-201ENST00000442797 145 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.91□□□□□ -2.1
CDKL1Q00532 AL137159.1-201ENST00000452808 512 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.91□□□□□ -2.1
CDKL1Q00532 PRELID3BP1-201ENST00000457142 540 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 RNU6-1037P-201ENST00000459571 107 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 AC107032.1-201ENST00000485945 480 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.91□□□□□ -2.1
CDKL1Q00532 AC025465.4-201ENST00000513422 638 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.91□□□□□ -2.1
CDKL1Q00532 RN7SKP256-201ENST00000517201 314 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 ZNF519P2-201ENST00000557032 169 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.91□□□□□ -2.1
CDKL1Q00532 AC109446.1-201ENST00000566172 220 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 EIF1P4-201ENST00000572664 335 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.91□□□□□ -2.1
CDKL1Q00532 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.91□□□□□ -2.1
CDKL1Q00532 AC018889.1-201ENST00000605372 397 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 AC025754.2-201ENST00000606491 432 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 RMST_3.1-201ENST00000611651 109 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 SNORA43.4-201ENST00000629559 138 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
CDKL1Q00532 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CDKL1Q00532 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CDKL1Q00532 AC245060.5-201ENST00000610778 3293 ntBASIC1.9□□□□□ -2.1
CDKL1Q00532 Y_RNA.256-201ENST00000364594 104 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 Y_RNA.402-201ENST00000383972 102 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 SNORD115-47-201ENST00000391226 86 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 HMGN2P39-201ENST00000398005 273 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 AL139413.1-201ENST00000421309 217 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.9□□□□□ -2.11
CDKL1Q00532 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.9□□□□□ -2.11
CDKL1Q00532 AL359672.1-201ENST00000442302 409 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 RPL32P28-201ENST00000443577 397 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.9□□□□□ -2.11
CDKL1Q00532 AC055731.1-201ENST00000474387 401 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 AC092989.1-201ENST00000481235 277 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.9□□□□□ -2.11
CDKL1Q00532 VN1R107P-201ENST00000601784 209 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.9□□□□□ -2.11
CDKL1Q00532 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.9□□□□□ -2.11
CDKL1Q00532 AL450472.1-202ENST00000637286 180 ntBASIC1.9□□□□□ -2.11
CDKL1Q00532 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CDKL1Q00532 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.9□□□□□ -2.11
CDKL1Q00532 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDKL1Q00532 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDKL1Q00532 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
CDKL1Q00532 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
CDKL1Q00532 RNU6-254P-201ENST00000363377 107 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDKL1Q00532 RNU6-142P-201ENST00000384019 107 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 RNU6-378P-201ENST00000384324 107 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CDKL1Q00532 MIR1294-201ENST00000408503 142 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 RNU6-325P-201ENST00000411132 105 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 ARL5AP1-201ENST00000418991 388 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.89□□□□□ -2.11
CDKL1Q00532 RPL23AP95-201ENST00000426806 265 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.89□□□□□ -2.11
CDKL1Q00532 AL133396.1-201ENST00000432048 687 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.89□□□□□ -2.11
CDKL1Q00532 snoU13.6-201ENST00000458785 104 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 HMGN2P26-201ENST00000463169 339 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 ANXA2P1-201ENST00000505539 926 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 RNU6-718P-201ENST00000516166 105 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 AP005660.1-201ENST00000522972 293 ntBASIC1.89□□□□□ -2.11
CDKL1Q00532 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.89□□□□□ -2.11
CDKL1Q00532 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms