Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC021851.1-201ENST00000608537 1082 ntBASIC-1.34□□□□□ -2.62
RPL39P62891 LINC02555-201ENST00000563933 1951 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 RNU6-743P-201ENST00000364151 106 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-1.35□□□□□ -2.63
RPL39P62891 RNA5SP25-201ENST00000410815 110 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 RAC1P6-201ENST00000423911 575 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-1.35□□□□□ -2.63
RPL39P62891 MTATP6P23-201ENST00000440153 476 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 USP9YP29-201ENST00000445112 563 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 RNU6-1037P-201ENST00000459571 107 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.35□□□□□ -2.63
RPL39P62891 RNU6-947P-201ENST00000516264 106 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 RNU6-1308P-201ENST00000516817 103 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 RNU6-678P-201ENST00000516832 109 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 RNA5SP94-201ENST00000516917 108 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-1.35□□□□□ -2.63
RPL39P62891 AP001328.1-201ENST00000528550 176 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
RPL39P62891 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-1.35□□□□□ -2.63
RPL39P62891 AC023827.1-201ENST00000569247 97 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 MIR548AX-201ENST00000580117 73 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 AC004223.2-201ENST00000590309 544 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 RPL21P136-201ENST00000605378 396 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 FAM157A-202ENST00000615155 405 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 AC008147.4-201ENST00000617570 1204 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 AC006504.8-201ENST00000621046 635 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 MIR6079-201ENST00000635807 62 ntBASIC-1.35□□□□□ -2.63
RPL39P62891 RNU2-33P-201ENST00000410344 192 ntBASIC-1.36□□□□□ -2.63
RPL39P62891 TMSB4XP1-201ENST00000424567 135 ntBASIC-1.36□□□□□ -2.63
RPL39P62891 MTCO2P1-201ENST00000424648 477 ntBASIC-1.36□□□□□ -2.63
RPL39P62891 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-1.36□□□□□ -2.63
RPL39P62891 RPL39P39-201ENST00000455840 151 ntBASIC-1.36□□□□□ -2.63
RPL39P62891 AC245047.8-201ENST00000456455 284 ntBASIC-1.36□□□□□ -2.63
RPL39P62891 AC023194.1-201ENST00000493084 308 ntBASIC-1.36□□□□□ -2.63
RPL39P62891 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC-1.36□□□□□ -2.63
RPL39P62891 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-1.36□□□□□ -2.63
RPL39P62891 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-1.36□□□□□ -2.63
RPL39P62891 AC004805.2-201ENST00000605382 482 ntBASIC-1.36□□□□□ -2.63
RPL39P62891 AC006001.4-201ENST00000622243 395 ntBASIC-1.36□□□□□ -2.63
RPL39P62891 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-1.36□□□□□ -2.63
RPL39P62891 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 RNU6-152P-201ENST00000384037 107 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 RNU2-43P-201ENST00000410306 190 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 SNORD83.1-201ENST00000411362 77 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 MTCO2P8-201ENST00000412213 658 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-1.37□□□□□ -2.63
RPL39P62891 AC069257.2-201ENST00000441819 155 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-1.37□□□□□ -2.63
RPL39P62891 USP9YP25-201ENST00000457708 443 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 OR9P1P-201ENST00000496431 281 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 MIR3612-201ENST00000579753 87 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 AC104695.3-201ENST00000604052 296 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 AC009318.4-201ENST00000620496 486 ntBASIC-1.37□□□□□ -2.63
RPL39P62891 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-1.37□□□□□ -2.63
RPL39P62891 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-1.38□□□□□ -2.63
RPL39P62891 RNA5SP323-201ENST00000391094 133 ntBASIC-1.38□□□□□ -2.63
RPL39P62891 RNU4-30P-201ENST00000410245 143 ntBASIC-1.38□□□□□ -2.63
RPL39P62891 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.38□□□□□ -2.63
RPL39P62891 AC008267.5-201ENST00000424928 265 ntBASIC-1.38□□□□□ -2.63
RPL39P62891 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC-1.38□□□□□ -2.63
RPL39P62891 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-1.38□□□□□ -2.63
RPL39P62891 AC024589.1-201ENST00000512207 263 ntBASIC-1.38□□□□□ -2.63
RPL39P62891 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-1.38□□□□□ -2.63
RPL39P62891 RNU6-965P-201ENST00000516721 96 ntBASIC-1.38□□□□□ -2.63
RPL39P62891 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-1.38□□□□□ -2.63
RPL39P62891 AL121992.2-201ENST00000606262 256 ntBASIC-1.38□□□□□ -2.63
RPL39P62891 MTND1P37-201ENST00000636562 264 ntBASIC-1.38□□□□□ -2.63
RPL39P62891 RNU6-161P-201ENST00000363051 106 ntBASIC-1.39□□□□□ -2.63
RPL39P62891 SNORD114-11-201ENST00000363738 75 ntBASIC-1.39□□□□□ -2.63
RPL39P62891 RNY4P16-201ENST00000364768 94 ntBASIC-1.39□□□□□ -2.63
RPL39P62891 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-1.39□□□□□ -2.63
RPL39P62891 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-1.39□□□□□ -2.63
RPL39P62891 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC-1.39□□□□□ -2.63
RPL39P62891 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-1.39□□□□□ -2.63
RPL39P62891 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-1.39□□□□□ -2.63
RPL39P62891 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-1.39□□□□□ -2.63
RPL39P62891 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.39□□□□□ -2.63
RPL39P62891 RNU4-49P-201ENST00000516080 140 ntBASIC-1.39□□□□□ -2.63
RPL39P62891 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-1.39□□□□□ -2.63
RPL39P62891 AL353997.4-201ENST00000586196 166 ntBASIC-1.39□□□□□ -2.63
RPL39P62891 MIR3976-201ENST00000606807 139 ntBASIC-1.39□□□□□ -2.63
RPL39P62891 SCARNA4-202ENST00000625402 129 ntBASIC-1.39□□□□□ -2.63
RPL39P62891 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-1.39□□□□□ -2.63
RPL39P62891 SNORD41-201ENST00000386967 70 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 RNA5SP163-201ENST00000410304 99 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.4□□□□□ -2.63
RPL39P62891 MTCO1P20-201ENST00000425366 358 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 USP9YP14-201ENST00000430663 563 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 MTCO3P29-201ENST00000432119 779 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 AL392003.1-201ENST00000434394 243 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-1.4□□□□□ -2.63
RPL39P62891 RNU6-848P-201ENST00000515948 107 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 RNU7-129P-201ENST00000516128 62 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 RNU6-617P-201ENST00000516147 107 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 RNU6-473P-201ENST00000516164 107 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 RNU6-1049P-201ENST00000516414 107 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 SCARNA1-201ENST00000517138 166 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 RNU6-889P-201ENST00000517189 103 ntBASIC-1.4□□□□□ -2.63
RPL39P62891 SUMO2P18-201ENST00000518873 252 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms