Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
USP46P62068 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
USP46P62068 AC026241.1-201ENST00000517873 2142 ntBASIC4.61□□□□□ -1.67
USP46P62068 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
USP46P62068 AC016588.2-201ENST00000632484 3021 ntBASIC4.61□□□□□ -1.67
USP46P62068 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
USP46P62068 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.61□□□□□ -1.67
USP46P62068 AC010889.1-201ENST00000566193 2666 ntBASIC4.6□□□□□ -1.67
USP46P62068 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
USP46P62068 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.6□□□□□ -1.67
USP46P62068 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
USP46P62068 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
USP46P62068 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.6□□□□□ -1.67
USP46P62068 Y_RNA.309-201ENST00000365046 111 ntBASIC4.6□□□□□ -1.67
USP46P62068 SNORA11F-201ENST00000408237 128 ntBASIC4.6□□□□□ -1.67
USP46P62068 MIR1185-2-201ENST00000408687 86 ntBASIC4.6□□□□□ -1.67
USP46P62068 RN7SKP177-201ENST00000410567 355 ntBASIC4.6□□□□□ -1.67
USP46P62068 AC092017.2-201ENST00000427600 362 ntBASIC4.6□□□□□ -1.67
USP46P62068 AC004975.1-201ENST00000428733 208 ntBASIC4.6□□□□□ -1.67
USP46P62068 AL121890.1-201ENST00000435457 205 ntBASIC4.6□□□□□ -1.67
USP46P62068 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.6□□□□□ -1.67
USP46P62068 AL158147.1-201ENST00000443970 75 ntBASIC4.6□□□□□ -1.67
USP46P62068 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.6□□□□□ -1.67
USP46P62068 AC112771.1-201ENST00000463581 102 ntBASIC4.6□□□□□ -1.67
USP46P62068 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.6□□□□□ -1.67
USP46P62068 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.6□□□□□ -1.67
USP46P62068 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.6□□□□□ -1.67
USP46P62068 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.6□□□□□ -1.67
USP46P62068 RNU6-168P-201ENST00000516189 101 ntBASIC4.6□□□□□ -1.67
USP46P62068 AL670379.3-201ENST00000605040 251 ntBASIC4.6□□□□□ -1.67
USP46P62068 MIR7154-201ENST00000620673 73 ntBASIC4.6□□□□□ -1.67
USP46P62068 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USP46P62068 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
USP46P62068 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
USP46P62068 RNU4-41P-201ENST00000364426 143 ntBASIC4.59□□□□□ -1.67
USP46P62068 RNA5SP366-201ENST00000365454 123 ntBASIC4.59□□□□□ -1.67
USP46P62068 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USP46P62068 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USP46P62068 MIR93-201ENST00000385024 80 ntBASIC4.59□□□□□ -1.67
USP46P62068 MIR586-201ENST00000385035 97 ntBASIC4.59□□□□□ -1.67
USP46P62068 AC245291.1-201ENST00000419501 328 ntBASIC4.59□□□□□ -1.67
USP46P62068 AC063976.4-201ENST00000421971 163 ntBASIC4.59□□□□□ -1.67
USP46P62068 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
USP46P62068 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USP46P62068 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.59□□□□□ -1.67
USP46P62068 AC140479.6-201ENST00000633535 357 ntBASIC4.59□□□□□ -1.67
USP46P62068 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
USP46P62068 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
USP46P62068 AC007256.1-201ENST00000392253 2765 ntBASIC4.59□□□□□ -1.68
USP46P62068 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.58□□□□□ -1.68
USP46P62068 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
USP46P62068 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.58□□□□□ -1.68
USP46P62068 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.58□□□□□ -1.68
USP46P62068 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP46P62068 AC138915.1-201ENST00000565427 1685 ntBASIC4.58□□□□□ -1.68
USP46P62068 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP46P62068 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
USP46P62068 AC015813.6-201ENST00000624409 5808 ntBASIC4.58□□□□□ -1.68
USP46P62068 SNORA20B-201ENST00000384220 132 ntBASIC4.58□□□□□ -1.68
USP46P62068 RNU1-57P-201ENST00000384491 166 ntBASIC4.58□□□□□ -1.68
USP46P62068 AL355796.1-201ENST00000406706 323 ntBASIC4.58□□□□□ -1.68
USP46P62068 RN7SKP167-201ENST00000411047 285 ntBASIC4.58□□□□□ -1.68
USP46P62068 Y_RNA.630-201ENST00000411370 108 ntBASIC4.58□□□□□ -1.68
USP46P62068 MLLT10P1-201ENST00000418346 262 ntBASIC4.58□□□□□ -1.68
USP46P62068 RNU6-437P-201ENST00000459408 95 ntBASIC4.58□□□□□ -1.68
USP46P62068 RPL35AP15-201ENST00000468042 339 ntBASIC4.58□□□□□ -1.68
USP46P62068 RPL30P14-201ENST00000482744 348 ntBASIC4.58□□□□□ -1.68
USP46P62068 RN7SL691P-201ENST00000494487 301 ntBASIC4.58□□□□□ -1.68
USP46P62068 AC024614.2-201ENST00000577584 372 ntBASIC4.58□□□□□ -1.68
USP46P62068 MIR3653-201ENST00000625572 110 ntBASIC4.58□□□□□ -1.68
USP46P62068 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.58□□□□□ -1.68
USP46P62068 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
USP46P62068 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.58□□□□□ -1.68
USP46P62068 AC010733.2-201ENST00000589496 5702 ntBASIC4.58□□□□□ -1.68
USP46P62068 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
USP46P62068 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP46P62068 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP46P62068 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP46P62068 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
USP46P62068 RNA5SP479-201ENST00000364858 117 ntBASIC4.57□□□□□ -1.68
USP46P62068 SNORA51.4-201ENST00000364993 124 ntBASIC4.57□□□□□ -1.68
USP46P62068 Y_RNA.432-201ENST00000384087 111 ntBASIC4.57□□□□□ -1.68
USP46P62068 SNORD116-21-201ENST00000384507 92 ntBASIC4.57□□□□□ -1.68
USP46P62068 MIR548A3-201ENST00000385297 97 ntBASIC4.57□□□□□ -1.68
USP46P62068 MIR1278-201ENST00000408753 81 ntBASIC4.57□□□□□ -1.68
USP46P62068 RNA5SP104-201ENST00000410989 118 ntBASIC4.57□□□□□ -1.68
USP46P62068 RNA5SP39-201ENST00000411245 120 ntBASIC4.57□□□□□ -1.68
USP46P62068 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.57□□□□□ -1.68
USP46P62068 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.57□□□□□ -1.68
USP46P62068 RNU1-61P-201ENST00000516107 151 ntBASIC4.57□□□□□ -1.68
USP46P62068 SNORA31.9-201ENST00000516429 84 ntBASIC4.57□□□□□ -1.68
USP46P62068 RNU5F-4P-201ENST00000516581 114 ntBASIC4.57□□□□□ -1.68
USP46P62068 RNU6-197P-201ENST00000516680 100 ntBASIC4.57□□□□□ -1.68
USP46P62068 AC027419.1-201ENST00000522976 328 ntBASIC4.57□□□□□ -1.68
USP46P62068 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.57□□□□□ -1.68
USP46P62068 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP46P62068 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP46P62068 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP46P62068 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP46P62068 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms