Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC068657.1-201ENST00000520807 306 ntBASIC5.34□□□□□ -1.55
ATN1P54259 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATN1P54259 AC027419.1-201ENST00000522976 328 ntBASIC5.34□□□□□ -1.55
ATN1P54259 MIR4472-2-201ENST00000582069 67 ntBASIC5.34□□□□□ -1.55
ATN1P54259 FAS-AS1.1-201ENST00000615327 126 ntBASIC5.34□□□□□ -1.55
ATN1P54259 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.34□□□□□ -1.55
ATN1P54259 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATN1P54259 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
ATN1P54259 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.34□□□□□ -1.55
ATN1P54259 AC112198.2-201ENST00000426589 6996 ntBASIC5.34□□□□□ -1.55
ATN1P54259 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ATN1P54259 OR56B2P-202ENST00000641377 2453 ntBASIC5.34□□□□□ -1.56
ATN1P54259 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ATN1P54259 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
ATN1P54259 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.33□□□□□ -1.56
ATN1P54259 AC009962.1-201ENST00000567327 3813 ntBASIC5.33□□□□□ -1.56
ATN1P54259 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.33□□□□□ -1.56
ATN1P54259 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ATN1P54259 AP001029.2-203ENST00000589795 4910 ntBASIC5.33□□□□□ -1.56
ATN1P54259 RNU6-661P-201ENST00000362409 107 ntBASIC5.33□□□□□ -1.56
ATN1P54259 RN7SKP280-201ENST00000364196 304 ntBASIC5.33□□□□□ -1.56
ATN1P54259 AL450023.3-201ENST00000440592 271 ntBASIC5.33□□□□□ -1.56
ATN1P54259 AL162591.2-201ENST00000449634 317 ntBASIC5.33□□□□□ -1.56
ATN1P54259 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC5.33□□□□□ -1.56
ATN1P54259 RNU1-131P-201ENST00000458943 161 ntBASIC5.33□□□□□ -1.56
ATN1P54259 Y_RNA.666-201ENST00000516187 112 ntBASIC5.33□□□□□ -1.56
ATN1P54259 IGLVIV-65-201ENST00000517313 360 ntBASIC5.33□□□□□ -1.56
ATN1P54259 CYCSP29-201ENST00000533731 318 ntBASIC5.33□□□□□ -1.56
ATN1P54259 AC011604.1-201ENST00000545978 196 ntBASIC5.33□□□□□ -1.56
ATN1P54259 AL161713.1-201ENST00000555538 145 ntBASIC5.33□□□□□ -1.56
ATN1P54259 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC5.33□□□□□ -1.56
ATN1P54259 AC087741.2-201ENST00000619415 172 ntBASIC5.33□□□□□ -1.56
ATN1P54259 AC006435.5-201ENST00000624486 112 ntBASIC5.33□□□□□ -1.56
ATN1P54259 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATN1P54259 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATN1P54259 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.33□□□□□ -1.56
ATN1P54259 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
ATN1P54259 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.33□□□□□ -1.56
ATN1P54259 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.33□□□□□ -1.56
ATN1P54259 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATN1P54259 AC010300.1-201ENST00000600671 5134 ntBASIC5.33□□□□□ -1.56
ATN1P54259 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.33□□□□□ -1.56
ATN1P54259 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATN1P54259 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATN1P54259 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATN1P54259 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.32□□□□□ -1.56
ATN1P54259 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATN1P54259 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.32□□□□□ -1.56
ATN1P54259 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
ATN1P54259 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ATN1P54259 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.32□□□□□ -1.56
ATN1P54259 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.32□□□□□ -1.56
ATN1P54259 SNORA2.2-201ENST00000365473 135 ntBASIC5.32□□□□□ -1.56
ATN1P54259 RNU1-82P-201ENST00000390851 165 ntBASIC5.32□□□□□ -1.56
ATN1P54259 RPL21P65-201ENST00000406094 466 ntBASIC5.32□□□□□ -1.56
ATN1P54259 RN7SKP156-201ENST00000410308 342 ntBASIC5.32□□□□□ -1.56
ATN1P54259 RPS3P1-201ENST00000456781 192 ntBASIC5.32□□□□□ -1.56
ATN1P54259 RNU7-57P-201ENST00000459540 60 ntBASIC5.32□□□□□ -1.56
ATN1P54259 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC5.32□□□□□ -1.56
ATN1P54259 RNU7-70P-201ENST00000516941 66 ntBASIC5.32□□□□□ -1.56
ATN1P54259 HSPE1P18-201ENST00000517602 280 ntBASIC5.32□□□□□ -1.56
ATN1P54259 AC021739.1-201ENST00000559631 174 ntBASIC5.32□□□□□ -1.56
ATN1P54259 MIR3683-201ENST00000580847 82 ntBASIC5.32□□□□□ -1.56
ATN1P54259 RPS15AP11-201ENST00000594193 385 ntBASIC5.32□□□□□ -1.56
ATN1P54259 AC005086.4-201ENST00000623065 213 ntBASIC5.32□□□□□ -1.56
ATN1P54259 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATN1P54259 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.32□□□□□ -1.56
ATN1P54259 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATN1P54259 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
ATN1P54259 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
ATN1P54259 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.31□□□□□ -1.56
ATN1P54259 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.31□□□□□ -1.56
ATN1P54259 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATN1P54259 SNORD115-19-201ENST00000363098 82 ntBASIC5.31□□□□□ -1.56
ATN1P54259 SNORD115-18-201ENST00000363293 82 ntBASIC5.31□□□□□ -1.56
ATN1P54259 RNU6-529P-201ENST00000363383 104 ntBASIC5.31□□□□□ -1.56
ATN1P54259 RNU4-67P-201ENST00000364569 141 ntBASIC5.31□□□□□ -1.56
ATN1P54259 SNORD115-17-201ENST00000364612 82 ntBASIC5.31□□□□□ -1.56
ATN1P54259 Y_RNA.340-201ENST00000365330 92 ntBASIC5.31□□□□□ -1.56
ATN1P54259 SNORA70C-201ENST00000384538 135 ntBASIC5.31□□□□□ -1.56
ATN1P54259 RNU2-40P-201ENST00000410833 196 ntBASIC5.31□□□□□ -1.56
ATN1P54259 SNRPGP13-201ENST00000442212 177 ntBASIC5.31□□□□□ -1.56
ATN1P54259 AC004223.1-201ENST00000479840 271 ntBASIC5.31□□□□□ -1.56
ATN1P54259 AC105137.1-201ENST00000484355 562 ntBASIC5.31□□□□□ -1.56
ATN1P54259 SNORD116-26-201ENST00000516006 96 ntBASIC5.31□□□□□ -1.56
ATN1P54259 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.31□□□□□ -1.56
ATN1P54259 MIR4429-201ENST00000580105 73 ntBASIC5.31□□□□□ -1.56
ATN1P54259 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.31□□□□□ -1.56
ATN1P54259 AC114781.5-201ENST00000615297 108 ntBASIC5.31□□□□□ -1.56
ATN1P54259 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATN1P54259 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.31□□□□□ -1.56
ATN1P54259 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.31□□□□□ -1.56
ATN1P54259 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.31□□□□□ -1.56
ATN1P54259 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATN1P54259 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.31□□□□□ -1.56
ATN1P54259 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC5.31□□□□□ -1.56
ATN1P54259 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
ATN1P54259 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATN1P54259 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC5.3□□□□□ -1.56
ATN1P54259 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 518.9 ms