Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RNU6-1141P-201ENST00000364520 107 ntBASIC1.46□□□□□ -2.18
ACLYP53396 RNU6-336P-201ENST00000364891 107 ntBASIC1.46□□□□□ -2.18
ACLYP53396 RNU6-203P-201ENST00000384038 104 ntBASIC1.46□□□□□ -2.18
ACLYP53396 RNU6-692P-201ENST00000384496 107 ntBASIC1.46□□□□□ -2.18
ACLYP53396 MIR7-2-201ENST00000384970 110 ntBASIC1.46□□□□□ -2.18
ACLYP53396 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
ACLYP53396 RNU4-46P-201ENST00000410818 138 ntBASIC1.46□□□□□ -2.18
ACLYP53396 RPL31P35-201ENST00000431058 377 ntBASIC1.46□□□□□ -2.18
ACLYP53396 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.46□□□□□ -2.18
ACLYP53396 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.46□□□□□ -2.18
ACLYP53396 AC130509.1-201ENST00000464158 433 ntBASIC1.46□□□□□ -2.18
ACLYP53396 AC005741.1-201ENST00000511094 432 ntBASIC1.46□□□□□ -2.18
ACLYP53396 RNU6-759P-201ENST00000516740 103 ntBASIC1.46□□□□□ -2.18
ACLYP53396 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.46□□□□□ -2.18
ACLYP53396 ZNF321P-202ENST00000550843 495 ntBASIC1.46□□□□□ -2.18
ACLYP53396 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.46□□□□□ -2.18
ACLYP53396 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.46□□□□□ -2.18
ACLYP53396 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.46□□□□□ -2.18
ACLYP53396 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.46□□□□□ -2.18
ACLYP53396 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.46□□□□□ -2.18
ACLYP53396 AC110760.3-201ENST00000598794 467 ntBASIC1.46□□□□□ -2.18
ACLYP53396 AC123912.5-201ENST00000605470 343 ntBASIC1.46□□□□□ -2.18
ACLYP53396 MIR98-201ENST00000606724 119 ntBASIC1.46□□□□□ -2.18
ACLYP53396 AP001506.1-201ENST00000615444 211 ntBASIC1.46□□□□□ -2.18
ACLYP53396 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
ACLYP53396 RNU6-26P-201ENST00000383985 107 ntBASIC1.45□□□□□ -2.18
ACLYP53396 RNU6-1029P-201ENST00000384109 107 ntBASIC1.45□□□□□ -2.18
ACLYP53396 SNORA40.3-201ENST00000390964 122 ntBASIC1.45□□□□□ -2.18
ACLYP53396 AC007098.1-201ENST00000420122 367 ntBASIC1.45□□□□□ -2.18
ACLYP53396 AL590135.1-201ENST00000422215 156 ntBASIC1.45□□□□□ -2.18
ACLYP53396 AC019205.3-201ENST00000424573 156 ntBASIC1.45□□□□□ -2.18
ACLYP53396 AC016700.2-201ENST00000446011 156 ntBASIC1.45□□□□□ -2.18
ACLYP53396 RPS29P15-201ENST00000458329 171 ntBASIC1.45□□□□□ -2.18
ACLYP53396 RNU1-131P-201ENST00000458943 161 ntBASIC1.45□□□□□ -2.18
ACLYP53396 COX6CP14-201ENST00000469580 174 ntBASIC1.45□□□□□ -2.18
ACLYP53396 AC010409.1-201ENST00000487382 476 ntBASIC1.45□□□□□ -2.18
ACLYP53396 AC015911.1-201ENST00000495111 156 ntBASIC1.45□□□□□ -2.18
ACLYP53396 AC096745.1-201ENST00000509945 370 ntBASIC1.45□□□□□ -2.18
ACLYP53396 Y_RNA.670-201ENST00000516255 105 ntBASIC1.45□□□□□ -2.18
ACLYP53396 SNORA31.17-201ENST00000516953 127 ntBASIC1.45□□□□□ -2.18
ACLYP53396 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.45□□□□□ -2.18
ACLYP53396 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.45□□□□□ -2.18
ACLYP53396 SUB1P4-201ENST00000566062 339 ntBASIC1.45□□□□□ -2.18
ACLYP53396 Z99289.3-201ENST00000605586 594 ntBASIC1.45□□□□□ -2.18
ACLYP53396 AC008945.2-201ENST00000606056 604 ntBASIC1.45□□□□□ -2.18
ACLYP53396 AC122133.1-201ENST00000613964 233 ntBASIC1.45□□□□□ -2.18
ACLYP53396 AC022513.1-201ENST00000624512 117 ntBASIC1.45□□□□□ -2.18
ACLYP53396 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ACLYP53396 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.44□□□□□ -2.18
ACLYP53396 RNU6-428P-201ENST00000362942 107 ntBASIC1.44□□□□□ -2.18
ACLYP53396 U3.4-201ENST00000363352 213 ntBASIC1.44□□□□□ -2.18
ACLYP53396 MIR1-2-201ENST00000384961 85 ntBASIC1.44□□□□□ -2.18
ACLYP53396 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.44□□□□□ -2.18
ACLYP53396 AC010975.2-201ENST00000427781 588 ntBASIC1.44□□□□□ -2.18
ACLYP53396 AC244670.1-201ENST00000436879 112 ntBASIC1.44□□□□□ -2.18
ACLYP53396 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.44□□□□□ -2.18
ACLYP53396 AC013470.1-201ENST00000453438 462 ntBASIC1.44□□□□□ -2.18
ACLYP53396 AL033528.1-201ENST00000453780 140 ntBASIC1.44□□□□□ -2.18
ACLYP53396 MTCO2P6-201ENST00000463134 685 ntBASIC1.44□□□□□ -2.18
ACLYP53396 MTCO3P7-201ENST00000510008 774 ntBASIC1.44□□□□□ -2.18
ACLYP53396 SNORA31.16-201ENST00000516773 139 ntBASIC1.44□□□□□ -2.18
ACLYP53396 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.44□□□□□ -2.18
ACLYP53396 VN1R107P-201ENST00000601784 209 ntBASIC1.44□□□□□ -2.18
ACLYP53396 AC107304.1-201ENST00000604229 296 ntBASIC1.44□□□□□ -2.18
ACLYP53396 AC006566.1-201ENST00000608943 513 ntBASIC1.44□□□□□ -2.18
ACLYP53396 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.44□□□□□ -2.18
ACLYP53396 AC022418.1-201ENST00000624118 445 ntBASIC1.44□□□□□ -2.18
ACLYP53396 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
ACLYP53396 SNORD114-27-201ENST00000363766 70 ntBASIC1.43□□□□□ -2.18
ACLYP53396 RNU4-56P-201ENST00000364700 142 ntBASIC1.43□□□□□ -2.18
ACLYP53396 MIR520E-201ENST00000384867 87 ntBASIC1.43□□□□□ -2.18
ACLYP53396 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
ACLYP53396 MTCYBP2-201ENST00000407745 171 ntBASIC1.43□□□□□ -2.18
ACLYP53396 RN7SKP61-201ENST00000410642 295 ntBASIC1.43□□□□□ -2.18
ACLYP53396 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
ACLYP53396 AC123900.1-201ENST00000420390 96 ntBASIC1.43□□□□□ -2.18
ACLYP53396 CYCSP46-201ENST00000423569 204 ntBASIC1.43□□□□□ -2.18
ACLYP53396 AL022238.1-201ENST00000442557 355 ntBASIC1.43□□□□□ -2.18
ACLYP53396 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.43□□□□□ -2.18
ACLYP53396 AC005908.1-201ENST00000468701 347 ntBASIC1.43□□□□□ -2.18
ACLYP53396 AC092436.3-201ENST00000511788 257 ntBASIC1.43□□□□□ -2.18
ACLYP53396 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.43□□□□□ -2.18
ACLYP53396 LRRC34P2-201ENST00000514850 553 ntBASIC1.43□□□□□ -2.18
ACLYP53396 RNU6-970P-201ENST00000516312 107 ntBASIC1.43□□□□□ -2.18
ACLYP53396 AC022880.1-201ENST00000534017 973 ntBASIC1.43□□□□□ -2.18
ACLYP53396 AC016957.1-201ENST00000534895 309 ntBASIC1.43□□□□□ -2.18
ACLYP53396 AC073413.2-201ENST00000604332 360 ntBASIC1.43□□□□□ -2.18
ACLYP53396 MIR8074-201ENST00000615081 81 ntBASIC1.43□□□□□ -2.18
ACLYP53396 AC022709.1-201ENST00000615967 87 ntBASIC1.43□□□□□ -2.18
ACLYP53396 uc_338.11-201ENST00000619132 160 ntBASIC1.43□□□□□ -2.18
ACLYP53396 AC120349.3-201ENST00000624377 529 ntBASIC1.43□□□□□ -2.18
ACLYP53396 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
ACLYP53396 RNU4-48P-201ENST00000365559 182 ntBASIC1.42□□□□□ -2.18
ACLYP53396 RNU5A-2P-201ENST00000384337 116 ntBASIC1.42□□□□□ -2.18
ACLYP53396 Y_RNA.480-201ENST00000384364 102 ntBASIC1.42□□□□□ -2.18
ACLYP53396 AC068050.1-201ENST00000394891 380 ntBASIC1.42□□□□□ -2.18
ACLYP53396 AL117339.3-201ENST00000418733 162 ntBASIC1.42□□□□□ -2.18
ACLYP53396 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.42□□□□□ -2.18
ACLYP53396 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.42□□□□□ -2.18
ACLYP53396 PRPS1P1-201ENST00000445305 876 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms