Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC016717.2-201ENST00000609089 5141 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 RNU6-562P-201ENST00000362731 107 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 RNU6-1329P-201ENST00000365664 107 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 RNU6-622P-201ENST00000384272 103 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 RNU6-95P-201ENST00000384697 107 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 MIR518C-201ENST00000384822 101 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 AL591034.2-201ENST00000402839 359 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 RNU6-1140P-201ENST00000410517 106 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 SNORD56-201ENST00000413522 71 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.34□□□□□ -2.03
HNF4AP41235 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.34□□□□□ -2.03
HNF4AP41235 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.34□□□□□ -2.03
HNF4AP41235 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.34□□□□□ -2.03
HNF4AP41235 MTND1P17-201ENST00000448961 204 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 MTND5P5-201ENST00000503764 376 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 AC079140.5-201ENST00000507882 310 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.34□□□□□ -2.03
HNF4AP41235 Y_RNA.675-201ENST00000516389 149 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 AC034114.1-201ENST00000520293 285 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.34□□□□□ -2.03
HNF4AP41235 AC026371.1-201ENST00000551867 419 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.34□□□□□ -2.03
HNF4AP41235 MIR4790-201ENST00000577799 79 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.34□□□□□ -2.03
HNF4AP41235 AL031274.2-201ENST00000599419 203 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 ELOCP5-201ENST00000604924 333 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.34□□□□□ -2.03
HNF4AP41235 MIR1302-1-201ENST00000637932 143 ntBASIC2.34□□□□□ -2.03
HNF4AP41235 AC069528.2-201ENST00000624849 1991 ntBASIC2.34□□□□□ -2.04
HNF4AP41235 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
HNF4AP41235 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HNF4AP41235 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.33□□□□□ -2.04
HNF4AP41235 AC073544.1-201ENST00000600110 1595 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 RNU4-79P-201ENST00000362764 141 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 Y_RNA.111-201ENST00000363248 100 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 RNU1-23P-201ENST00000363361 144 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 RNU6-529P-201ENST00000363383 104 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 RNU6-694P-201ENST00000364071 147 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HNF4AP41235 RNU6-128P-201ENST00000383976 107 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 RNU6-1032P-201ENST00000384100 107 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.33□□□□□ -2.04
HNF4AP41235 AC074085.1-201ENST00000413598 418 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.33□□□□□ -2.04
HNF4AP41235 GPM6BP3-201ENST00000442797 145 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.33□□□□□ -2.04
HNF4AP41235 MTCO1P29-201ENST00000496868 288 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HNF4AP41235 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.33□□□□□ -2.04
HNF4AP41235 AC104576.1-201ENST00000524225 88 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.33□□□□□ -2.04
HNF4AP41235 AC026271.5-201ENST00000577873 130 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 AC100830.2-201ENST00000581636 240 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 AL670379.2-201ENST00000604983 252 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 AC016727.1-205ENST00000605437 569 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 AC067747.1-201ENST00000608026 250 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 AC022140.2-201ENST00000623500 188 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 AL359757.2-201ENST00000624309 274 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HNF4AP41235 AC006026.1-201ENST00000444025 1803 ntBASIC2.33□□□□□ -2.04
HNF4AP41235 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.33□□□□□ -2.04
HNF4AP41235 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
HNF4AP41235 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HNF4AP41235 RNU6-655P-201ENST00000362858 107 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 Y_RNA.67-201ENST00000362870 100 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 RNU1-51P-201ENST00000365345 176 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 RNU6-214P-201ENST00000384130 107 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 MIR17-201ENST00000385012 84 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 RNA5SP390-201ENST00000410191 113 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.32□□□□□ -2.04
HNF4AP41235 NCOR1P3-201ENST00000420479 303 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HNF4AP41235 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HNF4AP41235 AC130509.1-201ENST00000464158 433 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 SNORA43.2-201ENST00000516652 128 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 SNORA31.23-201ENST00000517219 133 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.32□□□□□ -2.04
HNF4AP41235 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.32□□□□□ -2.04
HNF4AP41235 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.32□□□□□ -2.04
HNF4AP41235 AC090897.2-201ENST00000581715 130 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 MIR3162-201ENST00000581818 82 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 AC113139.1-201ENST00000605049 239 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.32□□□□□ -2.04
HNF4AP41235 MIR1291-201ENST00000627649 87 ntBASIC2.32□□□□□ -2.04
HNF4AP41235 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.32□□□□□ -2.04
HNF4AP41235 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
HNF4AP41235 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HNF4AP41235 ZNF658B-202ENST00000615961 3375 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 Y_RNA.535-201ENST00000384612 99 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 SNORA40.19-201ENST00000390846 128 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 HMGN2P39-201ENST00000398005 273 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 AL445529.1-201ENST00000398713 389 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 RNU2-23P-201ENST00000410545 195 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 RNU6-1304P-201ENST00000411374 106 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 AC009963.1-201ENST00000417265 157 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.31□□□□□ -2.04
HNF4AP41235 AC107399.1-201ENST00000451226 265 ntBASIC2.31□□□□□ -2.04
HNF4AP41235 RNU7-187P-201ENST00000458985 68 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms