Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC022695.1-201ENST00000522089 237 ntBASIC3.7□□□□□ -1.82
CCNFP41002 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.7□□□□□ -1.82
CCNFP41002 AC024405.2-202ENST00000532731 184 ntBASIC3.7□□□□□ -1.82
CCNFP41002 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNFP41002 MIR5685-201ENST00000579080 79 ntBASIC3.7□□□□□ -1.82
CCNFP41002 MIR3923-201ENST00000579521 83 ntBASIC3.7□□□□□ -1.82
CCNFP41002 MIR4425-201ENST00000580572 84 ntBASIC3.7□□□□□ -1.82
CCNFP41002 MIR3136-201ENST00000583498 78 ntBASIC3.7□□□□□ -1.82
CCNFP41002 AL137843.1-201ENST00000605078 385 ntBASIC3.7□□□□□ -1.82
CCNFP41002 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNFP41002 AC127459.3-201ENST00000624328 466 ntBASIC3.7□□□□□ -1.82
CCNFP41002 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNFP41002 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.7□□□□□ -1.82
CCNFP41002 AC091152.2-201ENST00000591628 2569 ntBASIC3.7□□□□□ -1.82
CCNFP41002 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCNFP41002 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCNFP41002 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CCNFP41002 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCNFP41002 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CCNFP41002 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCNFP41002 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCNFP41002 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CCNFP41002 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCNFP41002 GABRG2-229ENST00000641017 3628 ntBASIC3.69□□□□□ -1.82
CCNFP41002 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.69□□□□□ -1.82
CCNFP41002 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCNFP41002 Y_RNA.76-201ENST00000362931 109 ntBASIC3.69□□□□□ -1.82
CCNFP41002 MIR30B-201ENST00000384850 88 ntBASIC3.69□□□□□ -1.82
CCNFP41002 AL512633.1-201ENST00000399931 655 ntBASIC3.69□□□□□ -1.82
CCNFP41002 MIR320B2-201ENST00000408479 138 ntBASIC3.69□□□□□ -1.82
CCNFP41002 RPS26P42-201ENST00000413485 326 ntBASIC3.69□□□□□ -1.82
CCNFP41002 RPL23AP36-201ENST00000413895 458 ntBASIC3.69□□□□□ -1.82
CCNFP41002 MRPS10P1-201ENST00000448483 130 ntBASIC3.69□□□□□ -1.82
CCNFP41002 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.69□□□□□ -1.82
CCNFP41002 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.69□□□□□ -1.82
CCNFP41002 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.69□□□□□ -1.82
CCNFP41002 SNORA84-201ENST00000459229 133 ntBASIC3.69□□□□□ -1.82
CCNFP41002 RNU6-625P-201ENST00000459412 107 ntBASIC3.69□□□□□ -1.82
CCNFP41002 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.69□□□□□ -1.82
CCNFP41002 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.69□□□□□ -1.82
CCNFP41002 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.69□□□□□ -1.82
CCNFP41002 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.69□□□□□ -1.82
CCNFP41002 AC034105.4-201ENST00000568304 277 ntBASIC3.69□□□□□ -1.82
CCNFP41002 MIR4423-201ENST00000580922 80 ntBASIC3.69□□□□□ -1.82
CCNFP41002 AL034555.1-201ENST00000604816 211 ntBASIC3.69□□□□□ -1.82
CCNFP41002 RNU6-91P-201ENST00000607774 107 ntBASIC3.69□□□□□ -1.82
CCNFP41002 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.69□□□□□ -1.82
CCNFP41002 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCNFP41002 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.69□□□□□ -1.82
CCNFP41002 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.69□□□□□ -1.82
CCNFP41002 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCNFP41002 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCNFP41002 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCNFP41002 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCNFP41002 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.68□□□□□ -1.82
CCNFP41002 SNORD114-19-201ENST00000363072 75 ntBASIC3.68□□□□□ -1.82
CCNFP41002 Y_RNA.230-201ENST00000364348 109 ntBASIC3.68□□□□□ -1.82
CCNFP41002 Y_RNA.383-201ENST00000383855 97 ntBASIC3.68□□□□□ -1.82
CCNFP41002 Y_RNA.418-201ENST00000384029 102 ntBASIC3.68□□□□□ -1.82
CCNFP41002 RNU6-793P-201ENST00000384233 104 ntBASIC3.68□□□□□ -1.82
CCNFP41002 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CCNFP41002 CBX3P9-201ENST00000402326 552 ntBASIC3.68□□□□□ -1.82
CCNFP41002 Y_RNA.590-201ENST00000410140 107 ntBASIC3.68□□□□□ -1.82
CCNFP41002 RNU4-61P-201ENST00000411243 107 ntBASIC3.68□□□□□ -1.82
CCNFP41002 RPS29P7-201ENST00000439662 171 ntBASIC3.68□□□□□ -1.82
CCNFP41002 AC103975.1-201ENST00000482506 483 ntBASIC3.68□□□□□ -1.82
CCNFP41002 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.68□□□□□ -1.82
CCNFP41002 SCARNA14-201ENST00000516903 136 ntBASIC3.68□□□□□ -1.82
CCNFP41002 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.68□□□□□ -1.82
CCNFP41002 AC087499.8-201ENST00000578406 226 ntBASIC3.68□□□□□ -1.82
CCNFP41002 AL162424.1-201ENST00000602325 221 ntBASIC3.68□□□□□ -1.82
CCNFP41002 AC069200.1-201ENST00000609511 323 ntBASIC3.68□□□□□ -1.82
CCNFP41002 XIST_intron.1-201ENST00000619444 68 ntBASIC3.68□□□□□ -1.82
CCNFP41002 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.68□□□□□ -1.82
CCNFP41002 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCNFP41002 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCNFP41002 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CCNFP41002 RNU6-799P-201ENST00000363567 107 ntBASIC3.67□□□□□ -1.82
CCNFP41002 RNU6-378P-201ENST00000384324 107 ntBASIC3.67□□□□□ -1.82
CCNFP41002 RN7SKP156-201ENST00000410308 342 ntBASIC3.67□□□□□ -1.82
CCNFP41002 AL139247.1-201ENST00000422768 325 ntBASIC3.67□□□□□ -1.82
CCNFP41002 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.67□□□□□ -1.82
CCNFP41002 Y_RNA.644-201ENST00000459006 113 ntBASIC3.67□□□□□ -1.82
CCNFP41002 Y_RNA.674-201ENST00000516362 113 ntBASIC3.67□□□□□ -1.82
CCNFP41002 AC008011.1-201ENST00000545989 227 ntBASIC3.67□□□□□ -1.82
CCNFP41002 AC018448.1-201ENST00000552843 316 ntBASIC3.67□□□□□ -1.82
CCNFP41002 RPL21P9-201ENST00000556149 474 ntBASIC3.67□□□□□ -1.82
CCNFP41002 MIR4429-201ENST00000580105 73 ntBASIC3.67□□□□□ -1.82
CCNFP41002 MIR5187-201ENST00000583479 76 ntBASIC3.67□□□□□ -1.82
CCNFP41002 AL391813.1-201ENST00000603098 260 ntBASIC3.67□□□□□ -1.82
CCNFP41002 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.67□□□□□ -1.82
CCNFP41002 FTX_2.1-201ENST00000618816 94 ntBASIC3.67□□□□□ -1.82
CCNFP41002 U6.98-201ENST00000637157 84 ntBASIC3.67□□□□□ -1.82
CCNFP41002 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCNFP41002 AL161912.2-201ENST00000565707 3007 ntBASIC3.67□□□□□ -1.82
CCNFP41002 AC099654.7-201ENST00000635788 2127 ntBASIC3.67□□□□□ -1.82
CCNFP41002 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCNFP41002 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCNFP41002 BX322639.1-202ENST00000423987 2213 ntBASIC3.66□□□□□ -1.82
CCNFP41002 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms