Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL133393.1-201ENST00000603277 287 ntBASIC3.14□□□□□ -1.91
CD40P25942 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.14□□□□□ -1.91
CD40P25942 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.14□□□□□ -1.91
CD40P25942 AC084757.4-201ENST00000616350 526 ntBASIC3.14□□□□□ -1.91
CD40P25942 AC005562.2-201ENST00000618264 111 ntBASIC3.14□□□□□ -1.91
CD40P25942 AC012314.7-201ENST00000619693 93 ntBASIC3.14□□□□□ -1.91
CD40P25942 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD40P25942 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.14□□□□□ -1.91
CD40P25942 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CD40P25942 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.14□□□□□ -1.91
CD40P25942 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.14□□□□□ -1.91
CD40P25942 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CD40P25942 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CD40P25942 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CD40P25942 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD40P25942 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CD40P25942 SNORA63.1-201ENST00000362493 131 ntBASIC3.13□□□□□ -1.91
CD40P25942 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD40P25942 SNORA18.2-201ENST00000383865 132 ntBASIC3.13□□□□□ -1.91
CD40P25942 SNORA18.3-201ENST00000384122 132 ntBASIC3.13□□□□□ -1.91
CD40P25942 MIR218-1-201ENST00000384999 110 ntBASIC3.13□□□□□ -1.91
CD40P25942 RNU6-1203P-201ENST00000410703 110 ntBASIC3.13□□□□□ -1.91
CD40P25942 AL159169.1-201ENST00000421119 127 ntBASIC3.13□□□□□ -1.91
CD40P25942 IFNA11P-201ENST00000446352 526 ntBASIC3.13□□□□□ -1.91
CD40P25942 UQCRBP2-201ENST00000447827 297 ntBASIC3.13□□□□□ -1.91
CD40P25942 SEM1P1-201ENST00000506694 209 ntBASIC3.13□□□□□ -1.91
CD40P25942 MTND4LP22-201ENST00000508209 276 ntBASIC3.13□□□□□ -1.91
CD40P25942 DEFB131C-201ENST00000528817 165 ntBASIC3.13□□□□□ -1.91
CD40P25942 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.13□□□□□ -1.91
CD40P25942 MIR7851-201ENST00000610611 160 ntBASIC3.13□□□□□ -1.91
CD40P25942 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.13□□□□□ -1.91
CD40P25942 AC058791.1-201ENST00000608412 3198 ntBASIC3.13□□□□□ -1.91
CD40P25942 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
CD40P25942 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.12□□□□□ -1.91
CD40P25942 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD40P25942 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD40P25942 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD40P25942 Y_RNA.14-201ENST00000362415 103 ntBASIC3.12□□□□□ -1.91
CD40P25942 RNU6-626P-201ENST00000363354 107 ntBASIC3.12□□□□□ -1.91
CD40P25942 RNA5SP322-201ENST00000363617 119 ntBASIC3.12□□□□□ -1.91
CD40P25942 Y_RNA.447-201ENST00000384184 113 ntBASIC3.12□□□□□ -1.91
CD40P25942 RNU6-102P-201ENST00000384485 104 ntBASIC3.12□□□□□ -1.91
CD40P25942 RNU1-89P-201ENST00000384592 164 ntBASIC3.12□□□□□ -1.91
CD40P25942 HMGN2P8-201ENST00000391458 268 ntBASIC3.12□□□□□ -1.91
CD40P25942 RPL30P4-201ENST00000429309 333 ntBASIC3.12□□□□□ -1.91
CD40P25942 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.12□□□□□ -1.91
CD40P25942 AC004386.2-201ENST00000441858 148 ntBASIC3.12□□□□□ -1.91
CD40P25942 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.12□□□□□ -1.91
CD40P25942 AC007395.1-201ENST00000451333 677 ntBASIC3.12□□□□□ -1.91
CD40P25942 RPL7P49-201ENST00000471402 708 ntBASIC3.12□□□□□ -1.91
CD40P25942 RN7SL293P-201ENST00000481765 281 ntBASIC3.12□□□□□ -1.91
CD40P25942 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.12□□□□□ -1.91
CD40P25942 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.12□□□□□ -1.91
CD40P25942 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.12□□□□□ -1.91
CD40P25942 MIR3199-1-201ENST00000582434 88 ntBASIC3.12□□□□□ -1.91
CD40P25942 MIR5006-201ENST00000583027 110 ntBASIC3.12□□□□□ -1.91
CD40P25942 AC020914.4-201ENST00000597690 277 ntBASIC3.12□□□□□ -1.91
CD40P25942 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.12□□□□□ -1.91
CD40P25942 AC099654.7-201ENST00000635788 2127 ntBASIC3.12□□□□□ -1.91
CD40P25942 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD40P25942 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD40P25942 MTND5P6-201ENST00000422338 1798 ntBASIC3.12□□□□□ -1.91
CD40P25942 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.12□□□□□ -1.91
CD40P25942 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
CD40P25942 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.12□□□□□ -1.91
CD40P25942 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD40P25942 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CD40P25942 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CD40P25942 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CD40P25942 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD40P25942 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD40P25942 RNU1-62P-201ENST00000362599 164 ntBASIC3.11□□□□□ -1.91
CD40P25942 SNORD46.1-201ENST00000364139 104 ntBASIC3.11□□□□□ -1.91
CD40P25942 Y_RNA.350-201ENST00000365409 98 ntBASIC3.11□□□□□ -1.91
CD40P25942 RNU6-20P-201ENST00000384106 107 ntBASIC3.11□□□□□ -1.91
CD40P25942 MIR29B2-201ENST00000385055 81 ntBASIC3.11□□□□□ -1.91
CD40P25942 Y_RNA.581-201ENST00000391017 97 ntBASIC3.11□□□□□ -1.91
CD40P25942 AL033519.2-201ENST00000403958 392 ntBASIC3.11□□□□□ -1.91
CD40P25942 AC004866.1-201ENST00000411748 78 ntBASIC3.11□□□□□ -1.91
CD40P25942 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.11□□□□□ -1.91
CD40P25942 ARF4P2-201ENST00000430209 526 ntBASIC3.11□□□□□ -1.91
CD40P25942 NDUFB1P1-201ENST00000435191 180 ntBASIC3.11□□□□□ -1.91
CD40P25942 PRSS3P4-201ENST00000453323 162 ntBASIC3.11□□□□□ -1.91
CD40P25942 RNU6-625P-201ENST00000459412 107 ntBASIC3.11□□□□□ -1.91
CD40P25942 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.11□□□□□ -1.91
CD40P25942 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.11□□□□□ -1.91
CD40P25942 TCL6_2.1-201ENST00000615162 119 ntBASIC3.11□□□□□ -1.91
CD40P25942 AP001282.2-201ENST00000616149 309 ntBASIC3.11□□□□□ -1.91
CD40P25942 SDR42E1P4-201ENST00000620894 481 ntBASIC3.11□□□□□ -1.91
CD40P25942 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD40P25942 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.11□□□□□ -1.91
CD40P25942 AC103988.1-201ENST00000566382 2177 ntBASIC3.11□□□□□ -1.91
CD40P25942 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CD40P25942 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CD40P25942 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CD40P25942 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CD40P25942 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CD40P25942 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CD40P25942 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CD40P25942 AC006504.1-201ENST00000562493 3666 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms