Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 ISCA1P1-201ENST00000426679 387 ntBASIC0.35□□□□□ -2.35
APCP25054 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.35□□□□□ -2.35
APCP25054 AL358794.1-201ENST00000445689 381 ntBASIC0.35□□□□□ -2.35
APCP25054 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.35□□□□□ -2.35
APCP25054 RPL31P3-201ENST00000458430 332 ntBASIC0.35□□□□□ -2.35
APCP25054 AC087477.1-201ENST00000465747 340 ntBASIC0.35□□□□□ -2.35
APCP25054 UBL5P1-201ENST00000507979 193 ntBASIC0.35□□□□□ -2.35
APCP25054 RNU5F-2P-201ENST00000516066 82 ntBASIC0.35□□□□□ -2.35
APCP25054 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.35□□□□□ -2.35
APCP25054 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.35□□□□□ -2.35
APCP25054 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.35□□□□□ -2.35
APCP25054 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.35□□□□□ -2.35
APCP25054 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.35□□□□□ -2.35
APCP25054 ADI1P3-201ENST00000549509 470 ntBASIC0.35□□□□□ -2.35
APCP25054 NACAP3-201ENST00000552100 481 ntBASIC0.35□□□□□ -2.35
APCP25054 AC019288.1-201ENST00000557918 224 ntBASIC0.35□□□□□ -2.35
APCP25054 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.35□□□□□ -2.35
APCP25054 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.35□□□□□ -2.35
APCP25054 PCMTD1P2-201ENST00000565017 355 ntBASIC0.35□□□□□ -2.35
APCP25054 RSL24D1P11-201ENST00000591045 491 ntBASIC0.35□□□□□ -2.35
APCP25054 AC105129.3-201ENST00000605455 485 ntBASIC0.35□□□□□ -2.35
APCP25054 AC106800.4-201ENST00000614905 153 ntBASIC0.35□□□□□ -2.35
APCP25054 AL359314.1-201ENST00000616913 261 ntBASIC0.35□□□□□ -2.35
APCP25054 AC024581.2-201ENST00000619986 252 ntBASIC0.35□□□□□ -2.35
APCP25054 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
APCP25054 RNU6-1210P-201ENST00000363775 107 ntBASIC0.34□□□□□ -2.35
APCP25054 RNU6-923P-201ENST00000364753 107 ntBASIC0.34□□□□□ -2.35
APCP25054 SNORA25.8-201ENST00000364831 128 ntBASIC0.34□□□□□ -2.35
APCP25054 RNU6-1200P-201ENST00000384162 107 ntBASIC0.34□□□□□ -2.35
APCP25054 RNU6-1274P-201ENST00000384557 107 ntBASIC0.34□□□□□ -2.35
APCP25054 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.34□□□□□ -2.35
APCP25054 RNA5SP501-201ENST00000410990 112 ntBASIC0.34□□□□□ -2.35
APCP25054 ELOCP17-201ENST00000414751 326 ntBASIC0.34□□□□□ -2.35
APCP25054 SNX3P1X-201ENST00000414887 175 ntBASIC0.34□□□□□ -2.35
APCP25054 ELOCP9-201ENST00000418624 239 ntBASIC0.34□□□□□ -2.35
APCP25054 AL590556.1-201ENST00000423231 483 ntBASIC0.34□□□□□ -2.35
APCP25054 HSPE1P21-201ENST00000438283 308 ntBASIC0.34□□□□□ -2.35
APCP25054 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.34□□□□□ -2.35
APCP25054 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.34□□□□□ -2.35
APCP25054 snoU13.11-201ENST00000459219 104 ntBASIC0.34□□□□□ -2.35
APCP25054 RPL30P1-201ENST00000488676 339 ntBASIC0.34□□□□□ -2.35
APCP25054 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.34□□□□□ -2.35
APCP25054 AC116347.2-201ENST00000514912 523 ntBASIC0.34□□□□□ -2.35
APCP25054 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.34□□□□□ -2.35
APCP25054 RNU6-572P-201ENST00000516724 80 ntBASIC0.34□□□□□ -2.35
APCP25054 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.34□□□□□ -2.35
APCP25054 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.34□□□□□ -2.35
APCP25054 AP002453.2-201ENST00000533503 320 ntBASIC0.34□□□□□ -2.35
APCP25054 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.34□□□□□ -2.35
APCP25054 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.34□□□□□ -2.35
APCP25054 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.34□□□□□ -2.35
APCP25054 MIR3167-201ENST00000579623 85 ntBASIC0.34□□□□□ -2.35
APCP25054 AC144521.1-201ENST00000607148 956 ntBASIC0.34□□□□□ -2.35
APCP25054 AL365434.2-201ENST00000607979 234 ntBASIC0.34□□□□□ -2.35
APCP25054 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.34□□□□□ -2.35
APCP25054 AL049777.1-201ENST00000622740 518 ntBASIC0.34□□□□□ -2.35
APCP25054 ZNF29P-201ENST00000225587 168 ntBASIC0.34□□□□□ -2.36
APCP25054 Y_RNA.46-201ENST00000362695 102 ntBASIC0.34□□□□□ -2.36
APCP25054 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
APCP25054 MIR604-201ENST00000384880 94 ntBASIC0.34□□□□□ -2.36
APCP25054 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
APCP25054 AL031779.1-201ENST00000415663 330 ntBASIC0.34□□□□□ -2.36
APCP25054 RPL22P18-201ENST00000417197 377 ntBASIC0.34□□□□□ -2.36
APCP25054 AC009518.2-201ENST00000418056 731 ntBASIC0.34□□□□□ -2.36
APCP25054 MRPL35P3-201ENST00000421557 364 ntBASIC0.34□□□□□ -2.36
APCP25054 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.34□□□□□ -2.36
APCP25054 AL512286.1-201ENST00000439244 400 ntBASIC0.34□□□□□ -2.36
APCP25054 BRK1P2-201ENST00000442875 223 ntBASIC0.34□□□□□ -2.36
APCP25054 MTND2P4-201ENST00000445034 1004 ntBASIC0.34□□□□□ -2.36
APCP25054 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.34□□□□□ -2.36
APCP25054 RNU7-94P-201ENST00000459576 63 ntBASIC0.34□□□□□ -2.36
APCP25054 AC130509.1-201ENST00000464158 433 ntBASIC0.34□□□□□ -2.36
APCP25054 AL163195.1-201ENST00000496941 348 ntBASIC0.34□□□□□ -2.36
APCP25054 HMGB1P28-201ENST00000507778 552 ntBASIC0.34□□□□□ -2.36
APCP25054 MTCO3P7-201ENST00000510008 774 ntBASIC0.34□□□□□ -2.36
APCP25054 AC112206.3-201ENST00000514578 389 ntBASIC0.34□□□□□ -2.36
APCP25054 SNORA31.3-201ENST00000516029 96 ntBASIC0.34□□□□□ -2.36
APCP25054 SNORD60.2-201ENST00000516883 86 ntBASIC0.34□□□□□ -2.36
APCP25054 COPS8P3-201ENST00000526024 482 ntBASIC0.34□□□□□ -2.36
APCP25054 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.34□□□□□ -2.36
APCP25054 BNIP3P40-201ENST00000596017 556 ntBASIC0.34□□□□□ -2.36
APCP25054 AC004987.4-201ENST00000603383 338 ntBASIC0.34□□□□□ -2.36
APCP25054 AC245014.2-201ENST00000603689 287 ntBASIC0.34□□□□□ -2.36
APCP25054 MTND3P19-201ENST00000603825 345 ntBASIC0.34□□□□□ -2.36
APCP25054 AC069431.2-201ENST00000604149 1099 ntBASIC0.34□□□□□ -2.36
APCP25054 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
APCP25054 AC246785.4-201ENST00000605374 287 ntBASIC0.34□□□□□ -2.36
APCP25054 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.34□□□□□ -2.36
APCP25054 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.34□□□□□ -2.36
APCP25054 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.34□□□□□ -2.36
APCP25054 AC010608.3-201ENST00000625048 527 ntBASIC0.34□□□□□ -2.36
APCP25054 RNU6-23P-201ENST00000363283 107 ntBASIC0.33□□□□□ -2.36
APCP25054 RNU4-1-201ENST00000363925 141 ntBASIC0.33□□□□□ -2.36
APCP25054 RNA5SP493-201ENST00000364115 91 ntBASIC0.33□□□□□ -2.36
APCP25054 SNORA25-201ENST00000384384 134 ntBASIC0.33□□□□□ -2.36
APCP25054 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
APCP25054 SNORA16.2-201ENST00000390991 127 ntBASIC0.33□□□□□ -2.36
APCP25054 RNU6-1025P-201ENST00000410629 104 ntBASIC0.33□□□□□ -2.36
APCP25054 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.33□□□□□ -2.36
APCP25054 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms