Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC010900.2-201ENST00000604508 210 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
HLA-DPA1P20036 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.86□□□□□ -2.11
HLA-DPA1P20036 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DPA1P20036 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DPA1P20036 RNU6-1103P-201ENST00000384150 107 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 RNU2-41P-201ENST00000410991 178 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.85□□□□□ -2.11
HLA-DPA1P20036 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-DPA1P20036 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DPA1P20036 RNU1-131P-201ENST00000458943 161 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 RPS3AP17-201ENST00000472594 777 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 AC008628.2-201ENST00000502605 298 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DPA1P20036 RN7SKP298-201ENST00000515950 94 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DPA1P20036 AC021231.3-201ENST00000558497 370 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 AC110588.1-201ENST00000559699 137 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 CYP4A27P-201ENST00000567218 190 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 AL391646.1-201ENST00000603860 190 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 AC007684.1-201ENST00000609671 477 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 MIR7843-201ENST00000622274 79 ntBASIC1.85□□□□□ -2.11
HLA-DPA1P20036 RNU6-378P-201ENST00000384324 107 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 U8.13-201ENST00000390842 128 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 RNA5SP219-201ENST00000390940 113 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AL606923.1-201ENST00000406616 190 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AP000275.1-201ENST00000411943 390 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AL121601.2-201ENST00000438019 707 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 MTCO2P3-201ENST00000442543 421 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 RPL31P3-201ENST00000458430 332 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AC116337.1-201ENST00000509680 687 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 ATP5EP1-201ENST00000510257 156 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 RNU6-295P-201ENST00000516901 104 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DPA1P20036 EIF4A1P12-201ENST00000551910 141 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AC090115.3-201ENST00000553218 849 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AC119751.7-201ENST00000600494 245 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 AL450472.1-202ENST00000637286 180 ntBASIC1.84□□□□□ -2.11
HLA-DPA1P20036 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HLA-DPA1P20036 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
HLA-DPA1P20036 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
HLA-DPA1P20036 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
HLA-DPA1P20036 Y_RNA.296-201ENST00000364930 108 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 SNORA36A-201ENST00000384221 132 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 RNU6-1158P-201ENST00000391167 107 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 AL030996.1-201ENST00000411430 235 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 AC139712.2-201ENST00000424302 339 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 MTCO2P19-201ENST00000427513 598 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 RNU7-14P-201ENST00000459331 62 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 RNU7-138P-201ENST00000459479 64 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 RNU5F-4P-201ENST00000516581 114 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 HSBP1P1-201ENST00000555205 166 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DPA1P20036 AC025811.1-201ENST00000604312 472 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 AC068944.2-201ENST00000610373 403 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 HULC.1-201ENST00000612720 240 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DPA1P20036 ELL2P3-201ENST00000457883 1602 ntBASIC1.83□□□□□ -2.12
HLA-DPA1P20036 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
HLA-DPA1P20036 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HLA-DPA1P20036 Y_RNA.255-201ENST00000364581 97 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 Y_RNA.381-201ENST00000365666 102 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 SNORA32.2-201ENST00000384049 122 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 MIR30A-201ENST00000385092 71 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 SNORD73A-201ENST00000386062 65 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 MTND1P26-201ENST00000440488 538 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.82□□□□□ -2.12
HLA-DPA1P20036 HMGN2P23-201ENST00000456759 269 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 MTCO2P18-201ENST00000457151 658 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 AC104564.1-201ENST00000493028 407 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 CCDC34P1-201ENST00000507441 517 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 RNU6-1098P-201ENST00000516772 96 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DPA1P20036 SUB1P4-201ENST00000566062 339 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 MIR3198-2-201ENST00000577868 80 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DPA1P20036 MIR6845-201ENST00000613182 61 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DPA1P20036 MIR3974-201ENST00000637126 96 ntBASIC1.82□□□□□ -2.12
HLA-DPA1P20036 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.82□□□□□ -2.12
HLA-DPA1P20036 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
HLA-DPA1P20036 Y_RNA.1-201ENST00000352915 104 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 MIR9-3-201ENST00000385084 90 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 MIR208B-201ENST00000401172 77 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 AC090960.1-201ENST00000421072 306 ntBASIC1.81□□□□□ -2.12
HLA-DPA1P20036 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DPA1P20036 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms