Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC087752.4-201ENST00000605911 462 ntBASIC1.52□□□□□ -2.17
NCK1P16333 AC064807.4-201ENST00000607201 407 ntBASIC1.52□□□□□ -2.17
NCK1P16333 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
NCK1P16333 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.52□□□□□ -2.17
NCK1P16333 ZNF72P-201ENST00000425869 1908 ntBASIC1.51□□□□□ -2.17
NCK1P16333 SNORA12-201ENST00000391162 147 ntBASIC1.51□□□□□ -2.17
NCK1P16333 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.51□□□□□ -2.17
NCK1P16333 RPL7P54-201ENST00000438336 674 ntBASIC1.51□□□□□ -2.17
NCK1P16333 MTCO1P44-201ENST00000441935 243 ntBASIC1.51□□□□□ -2.17
NCK1P16333 ARL2BPP4-201ENST00000506854 471 ntBASIC1.51□□□□□ -2.17
NCK1P16333 AK3P2-201ENST00000507976 429 ntBASIC1.51□□□□□ -2.17
NCK1P16333 FAM206BP-201ENST00000510179 541 ntBASIC1.51□□□□□ -2.17
NCK1P16333 SNORA31.16-201ENST00000516773 139 ntBASIC1.51□□□□□ -2.17
NCK1P16333 RNU6-548P-201ENST00000517083 115 ntBASIC1.51□□□□□ -2.17
NCK1P16333 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.51□□□□□ -2.17
NCK1P16333 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
NCK1P16333 AC110760.3-201ENST00000598794 467 ntBASIC1.51□□□□□ -2.17
NCK1P16333 AC012507.3-201ENST00000603556 477 ntBASIC1.51□□□□□ -2.17
NCK1P16333 U2.17-201ENST00000611454 95 ntBASIC1.51□□□□□ -2.17
NCK1P16333 AL590240.4-201ENST00000616908 390 ntBASIC1.51□□□□□ -2.17
NCK1P16333 AL450472.1-202ENST00000637286 180 ntBASIC1.51□□□□□ -2.17
NCK1P16333 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NCK1P16333 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
NCK1P16333 RNU6-552P-201ENST00000362869 119 ntBASIC1.5□□□□□ -2.17
NCK1P16333 SNORD31B-201ENST00000364977 69 ntBASIC1.5□□□□□ -2.17
NCK1P16333 RNU6-827P-201ENST00000365553 106 ntBASIC1.5□□□□□ -2.17
NCK1P16333 RNU6-338P-201ENST00000383888 105 ntBASIC1.5□□□□□ -2.17
NCK1P16333 MTCO3P41-201ENST00000414801 328 ntBASIC1.5□□□□□ -2.17
NCK1P16333 MTCO1P21-201ENST00000416634 589 ntBASIC1.5□□□□□ -2.17
NCK1P16333 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.5□□□□□ -2.17
NCK1P16333 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.5□□□□□ -2.17
NCK1P16333 HMGN2P23-201ENST00000456759 269 ntBASIC1.5□□□□□ -2.17
NCK1P16333 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.5□□□□□ -2.17
NCK1P16333 AC087477.1-201ENST00000465747 340 ntBASIC1.5□□□□□ -2.17
NCK1P16333 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.5□□□□□ -2.17
NCK1P16333 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.5□□□□□ -2.17
NCK1P16333 SNORD60.2-201ENST00000516883 86 ntBASIC1.5□□□□□ -2.17
NCK1P16333 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.5□□□□□ -2.17
NCK1P16333 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.5□□□□□ -2.17
NCK1P16333 AC025754.2-201ENST00000606491 432 ntBASIC1.5□□□□□ -2.17
NCK1P16333 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
NCK1P16333 MTND4P23-201ENST00000447723 1363 ntBASIC1.49□□□□□ -2.17
NCK1P16333 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
NCK1P16333 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.49□□□□□ -2.17
NCK1P16333 MIR340-201ENST00000362125 95 ntBASIC1.49□□□□□ -2.17
NCK1P16333 RNU1-76P-201ENST00000362903 159 ntBASIC1.49□□□□□ -2.17
NCK1P16333 Y_RNA.159-201ENST00000363674 87 ntBASIC1.49□□□□□ -2.17
NCK1P16333 Y_RNA.169-201ENST00000363745 96 ntBASIC1.49□□□□□ -2.17
NCK1P16333 RNU6-1106P-201ENST00000390845 107 ntBASIC1.49□□□□□ -2.17
NCK1P16333 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.49□□□□□ -2.17
NCK1P16333 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.49□□□□□ -2.17
NCK1P16333 VN1R108P-201ENST00000431580 830 ntBASIC1.49□□□□□ -2.17
NCK1P16333 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.49□□□□□ -2.17
NCK1P16333 AL591806.2-201ENST00000433122 173 ntBASIC1.49□□□□□ -2.17
NCK1P16333 AL121601.2-201ENST00000438019 707 ntBASIC1.49□□□□□ -2.17
NCK1P16333 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.49□□□□□ -2.17
NCK1P16333 AL031274.1-201ENST00000450334 232 ntBASIC1.49□□□□□ -2.17
NCK1P16333 RNU7-180P-201ENST00000459240 63 ntBASIC1.49□□□□□ -2.17
NCK1P16333 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.49□□□□□ -2.17
NCK1P16333 AC025465.3-201ENST00000510570 311 ntBASIC1.49□□□□□ -2.17
NCK1P16333 AC010493.1-201ENST00000513479 292 ntBASIC1.49□□□□□ -2.17
NCK1P16333 RNA5SP182-201ENST00000516064 82 ntBASIC1.49□□□□□ -2.17
NCK1P16333 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.49□□□□□ -2.17
NCK1P16333 AC109446.1-201ENST00000566172 220 ntBASIC1.49□□□□□ -2.17
NCK1P16333 AC040904.1-201ENST00000590850 223 ntBASIC1.49□□□□□ -2.17
NCK1P16333 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.49□□□□□ -2.17
NCK1P16333 AC078795.3-201ENST00000602913 472 ntBASIC1.49□□□□□ -2.17
NCK1P16333 Z98751.3-201ENST00000604447 521 ntBASIC1.49□□□□□ -2.17
NCK1P16333 AC009994.1-201ENST00000606889 253 ntBASIC1.49□□□□□ -2.17
NCK1P16333 MIR8074-201ENST00000615081 81 ntBASIC1.49□□□□□ -2.17
NCK1P16333 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.49□□□□□ -2.17
NCK1P16333 AC022513.1-201ENST00000624512 117 ntBASIC1.49□□□□□ -2.17
NCK1P16333 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NCK1P16333 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NCK1P16333 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NCK1P16333 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.48□□□□□ -2.17
NCK1P16333 SNORA32.2-201ENST00000384049 122 ntBASIC1.48□□□□□ -2.17
NCK1P16333 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
NCK1P16333 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
NCK1P16333 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.48□□□□□ -2.17
NCK1P16333 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.48□□□□□ -2.17
NCK1P16333 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.48□□□□□ -2.17
NCK1P16333 AC016925.1-201ENST00000458303 298 ntBASIC1.48□□□□□ -2.17
NCK1P16333 AC130509.1-201ENST00000464158 433 ntBASIC1.48□□□□□ -2.17
NCK1P16333 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
NCK1P16333 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.48□□□□□ -2.17
NCK1P16333 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.48□□□□□ -2.17
NCK1P16333 MIR449C-201ENST00000516047 92 ntBASIC1.48□□□□□ -2.17
NCK1P16333 AC090115.3-201ENST00000553218 849 ntBASIC1.48□□□□□ -2.17
NCK1P16333 HIF1AP1-201ENST00000553642 175 ntBASIC1.48□□□□□ -2.17
NCK1P16333 AC103996.1-201ENST00000555468 102 ntBASIC1.48□□□□□ -2.17
NCK1P16333 AC015712.3-201ENST00000559380 164 ntBASIC1.48□□□□□ -2.17
NCK1P16333 uc_338.5-201ENST00000611839 155 ntBASIC1.48□□□□□ -2.17
NCK1P16333 AC008147.4-201ENST00000617570 1204 ntBASIC1.48□□□□□ -2.17
NCK1P16333 AC136475.10-201ENST00000620253 385 ntBASIC1.48□□□□□ -2.17
NCK1P16333 RNU6-112P-201ENST00000363599 104 ntBASIC1.47□□□□□ -2.17
NCK1P16333 RNU6-438P-201ENST00000365561 103 ntBASIC1.47□□□□□ -2.17
NCK1P16333 RNU2-9P-201ENST00000410194 145 ntBASIC1.47□□□□□ -2.17
NCK1P16333 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.47□□□□□ -2.17
NCK1P16333 AC007395.1-201ENST00000451333 677 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms