Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 RPL17P35-201ENST00000432217 549 ntBASIC-0.09□□□□□ -2.42
COL6A3P12111 AL606662.1-201ENST00000445763 553 ntBASIC-0.09□□□□□ -2.42
COL6A3P12111 AC068135.1-201ENST00000446164 246 ntBASIC-0.09□□□□□ -2.42
COL6A3P12111 AP003392.2-201ENST00000527269 208 ntBASIC-0.09□□□□□ -2.42
COL6A3P12111 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
COL6A3P12111 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.09□□□□□ -2.42
COL6A3P12111 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.09□□□□□ -2.42
COL6A3P12111 AC022960.3-201ENST00000619794 441 ntBASIC-0.09□□□□□ -2.42
COL6A3P12111 RNA5SP493-201ENST00000364115 91 ntBASIC-0.1□□□□□ -2.42
COL6A3P12111 RNU6-969P-201ENST00000383900 105 ntBASIC-0.1□□□□□ -2.42
COL6A3P12111 RNU6-441P-201ENST00000384545 106 ntBASIC-0.1□□□□□ -2.42
COL6A3P12111 RAB28P5-201ENST00000427490 651 ntBASIC-0.1□□□□□ -2.42
COL6A3P12111 RPS15AP9-201ENST00000439856 381 ntBASIC-0.1□□□□□ -2.42
COL6A3P12111 AC002381.1-201ENST00000447049 280 ntBASIC-0.1□□□□□ -2.42
COL6A3P12111 AL031313.1-201ENST00000448435 256 ntBASIC-0.1□□□□□ -2.42
COL6A3P12111 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-0.1□□□□□ -2.42
COL6A3P12111 U7.7-201ENST00000459276 60 ntBASIC-0.1□□□□□ -2.42
COL6A3P12111 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.1□□□□□ -2.42
COL6A3P12111 MTCO3P7-201ENST00000510008 774 ntBASIC-0.1□□□□□ -2.42
COL6A3P12111 RNU6-488P-201ENST00000515918 99 ntBASIC-0.1□□□□□ -2.42
COL6A3P12111 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.1□□□□□ -2.42
COL6A3P12111 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.1□□□□□ -2.42
COL6A3P12111 AC124947.2-202ENST00000552735 133 ntBASIC-0.1□□□□□ -2.42
COL6A3P12111 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-0.1□□□□□ -2.42
COL6A3P12111 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
COL6A3P12111 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.1□□□□□ -2.43
COL6A3P12111 DAP3P1-201ENST00000441522 278 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL6A3P12111 AP001324.2-201ENST00000461163 319 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 RPS26P48-201ENST00000491713 339 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 HMGB1P30-201ENST00000492455 606 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL6A3P12111 SNORA40.12-201ENST00000516329 111 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL6A3P12111 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL6A3P12111 AC025423.5-201ENST00000550230 219 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL6A3P12111 AC107304.1-201ENST00000604229 296 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AL390237.1-201ENST00000404226 1415 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 MTND5P31-201ENST00000419366 1374 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 RNU6-312P-201ENST00000364629 107 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 RNY1P8-201ENST00000383970 114 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AL121978.1-201ENST00000402778 359 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 TAF13P2-201ENST00000416876 286 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AC011233.1-201ENST00000422812 283 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 SNRPEP9-201ENST00000436794 238 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 MTND2P24-201ENST00000453434 806 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 HMGN3P1-201ENST00000453847 193 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL6A3P12111 SNORA31.2-201ENST00000516019 134 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 RNU6-667P-201ENST00000517186 102 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 NACAP3-201ENST00000552100 481 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL6A3P12111 AC126365.2-201ENST00000580630 379 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AL356157.2-201ENST00000605122 111 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 MIR3976-201ENST00000606807 139 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AC021506.2-201ENST00000612354 169 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 AP000676.3-201ENST00000623299 569 ntBASIC-0.1□□□□□ -2.43
COL6A3P12111 RNU6-944P-201ENST00000364023 107 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 SNORD114-6-201ENST00000364393 72 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 RNU6-877P-201ENST00000383868 107 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 SNORA48.1-201ENST00000390879 135 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL6A3P12111 C8orf59P1-201ENST00000429930 303 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.11□□□□□ -2.43
COL6A3P12111 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.11□□□□□ -2.43
COL6A3P12111 SNORD126-201ENST00000459475 77 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 RNU6-863P-201ENST00000515989 104 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 SNORD79.1-201ENST00000516069 84 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.11□□□□□ -2.43
COL6A3P12111 COX6CP10-201ENST00000416832 224 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL6A3P12111 FCF1P6-201ENST00000456841 595 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 MTCO2P18-201ENST00000457151 658 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 RNU7-21P-201ENST00000459430 62 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 RNU6-202P-201ENST00000515998 96 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL6A3P12111 AC022616.2-201ENST00000523185 300 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL6A3P12111 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-0.11□□□□□ -2.43
COL6A3P12111 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.11□□□□□ -2.43
COL6A3P12111 AC080188.3-201ENST00000624842 748 ntBASIC-0.11□□□□□ -2.43
COL6A3P12111 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RNU6-163P-201ENST00000384396 106 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RNU6-140P-201ENST00000384566 108 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL6A3P12111 MTND1P20-201ENST00000430341 950 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AL392003.1-201ENST00000434394 243 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.12□□□□□ -2.43
COL6A3P12111 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL6A3P12111 MTCO3P2-201ENST00000457365 171 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms