Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MIR7154-201ENST00000620673 73 ntBASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 SNORD115-32-201ENST00000364079 82 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 Y_RNA.217-201ENST00000364214 105 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 Y_RNA.261-201ENST00000364631 102 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 Y_RNA.262-201ENST00000364641 102 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 RNU6-1175P-201ENST00000365200 107 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 SNORA46.1-201ENST00000391069 153 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 AL357075.1-201ENST00000404107 726 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 AL357139.1-201ENST00000407792 426 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 RNU6-257P-201ENST00000410238 98 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 AC007969.2-201ENST00000441891 191 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 AC096638.1-201ENST00000444678 216 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 AC012308.1-201ENST00000451232 178 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 Y_RNA.641-201ENST00000459414 105 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 AC010469.1-201ENST00000463864 576 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 RN7SKP49-201ENST00000516675 260 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 AP000867.2-201ENST00000532468 320 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 MTND6P33-201ENST00000571794 183 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 MIR8057-201ENST00000620957 69 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 U4.6-201ENST00000621618 127 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 UBE3AP2-201ENST00000429033 2259 ntBASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.81□□□□□ -1.64
CSB-PGBD3P0DP91 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 RNU6-653P-201ENST00000363074 106 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 RNU4-56P-201ENST00000364700 142 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 SNORD32A-201ENST00000364805 84 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 Y_RNA.353-201ENST00000365440 108 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 POLR2KP2-201ENST00000438155 177 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AP001486.1-201ENST00000463339 476 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AL049873.1-201ENST00000480540 376 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 HMGB3P3-201ENST00000510526 400 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AC091874.1-201ENST00000511402 339 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 SNORD116-25-201ENST00000516517 92 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 SNORA31.23-201ENST00000517219 133 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AP005660.1-201ENST00000522972 293 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 MIR4298-201ENST00000584380 73 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AL356157.2-201ENST00000605122 111 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AC015813.4-201ENST00000610469 179 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 MIR3529-201ENST00000637713 78 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 AF127577.6-201ENST00000623352 2191 ntBASIC4.8□□□□□ -1.64
CSB-PGBD3P0DP91 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 RNA5SP205-201ENST00000364653 136 ntBASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 RNU6-1286P-201ENST00000383871 107 ntBASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 Y_RNA.571-201ENST00000384753 98 ntBASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 MIR544A-201ENST00000384855 91 ntBASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 U3.19-201ENST00000390893 196 ntBASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 RNU6-1001P-201ENST00000411265 100 ntBASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 AC010099.1-201ENST00000455434 375 ntBASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 ACA59.2-201ENST00000517061 156 ntBASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 MIR5692C2-201ENST00000577959 77 ntBASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 AC068831.7-201ENST00000616954 363 ntBASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 IPO8P1-201ENST00000455509 3109 ntBASIC4.79□□□□□ -1.64
CSB-PGBD3P0DP91 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 OTUD4P1-201ENST00000237841 3067 ntBASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 MIR153-2-201ENST00000385225 87 ntBASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 AP000567.1-201ENST00000406413 156 ntBASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 AL035461.1-201ENST00000421490 332 ntBASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 SNRPGP7-201ENST00000469016 106 ntBASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 AC114982.1-201ENST00000469402 321 ntBASIC4.78□□□□□ -1.64
CSB-PGBD3P0DP91 SNORA40.9-201ENST00000515895 93 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms