Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RNU6-428P-201ENST00000362942 107 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 RNU6-336P-201ENST00000364891 107 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 RNU6-43P-201ENST00000384302 107 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 RNU6-692P-201ENST00000384496 107 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 RNU6-606P-201ENST00000384721 111 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 RNU6-1106P-201ENST00000390845 107 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 SNORA67.5-201ENST00000391036 107 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 RNU4-62P-201ENST00000410125 130 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.59□□□□□ -2.15
CAPN1P07384 AC010975.2-201ENST00000427781 588 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 AL031274.1-201ENST00000450334 232 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 RPL31P3-201ENST00000458430 332 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 GMFBP1-201ENST00000467831 427 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.59□□□□□ -2.15
CAPN1P07384 MIR449C-201ENST00000516047 92 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 RNU6-970P-201ENST00000516312 107 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 SNORA25.17-201ENST00000517184 124 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.59□□□□□ -2.15
CAPN1P07384 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.59□□□□□ -2.15
CAPN1P07384 AGGF1P4-201ENST00000568249 801 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 MIR4498-201ENST00000577599 66 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 MIR4528-201ENST00000577763 90 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 AC008752.3-201ENST00000588113 712 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 AC005786.1-201ENST00000588553 154 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 VN1R107P-201ENST00000601784 209 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 AC016727.1-205ENST00000605437 569 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 AC002044.1-201ENST00000606707 158 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 AC068944.2-201ENST00000610373 403 ntBASIC1.59□□□□□ -2.15
CAPN1P07384 ZNF680P1-201ENST00000436625 1469 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 AP000568.1-201ENST00000282964 442 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 RNU4-15P-201ENST00000362613 141 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 Y_RNA.159-201ENST00000363674 87 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 MTCO3P41-201ENST00000414801 328 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 BTF3P4-201ENST00000418852 495 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.58□□□□□ -2.16
CAPN1P07384 SCARNA18-201ENST00000459004 134 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 AC079382.1-201ENST00000493346 557 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 AK3P2-201ENST00000507976 429 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 RNU6-567P-201ENST00000516746 107 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.58□□□□□ -2.16
CAPN1P07384 AL356057.1-201ENST00000533798 831 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 AC007834.2-201ENST00000536310 343 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 MTND3P12-201ENST00000559068 328 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 MIR5583-1-201ENST00000580941 59 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 AC110760.3-201ENST00000598794 467 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.58□□□□□ -2.16
CAPN1P07384 AC109347.2-201ENST00000610220 349 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 AC072046.2-201ENST00000618366 268 ntBASIC1.58□□□□□ -2.16
CAPN1P07384 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.57□□□□□ -2.16
CAPN1P07384 AC092268.1-201ENST00000342691 405 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 SNORD32B-201ENST00000364460 84 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 Y_RNA.338-201ENST00000365320 114 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 AC068050.1-201ENST00000394891 380 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 AL117339.3-201ENST00000418733 162 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 MTND1P26-201ENST00000440488 538 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 AC013470.1-201ENST00000453438 462 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 HMGN1P13-201ENST00000505795 138 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.57□□□□□ -2.16
CAPN1P07384 Y_RNA.695-201ENST00000516715 107 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 MTCO2P4-201ENST00000517968 247 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 MTCO3P23-201ENST00000561363 289 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.57□□□□□ -2.16
CAPN1P07384 MTATP6P3-201ENST00000581686 676 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 VN1R80P-201ENST00000597126 338 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 AC068790.2-201ENST00000602601 557 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 AP001596.2-201ENST00000608410 312 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CAPN1P07384 AL158063.1-201ENST00000615349 536 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 AL590240.4-201ENST00000616908 390 ntBASIC1.57□□□□□ -2.16
CAPN1P07384 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CAPN1P07384 LINC02555-201ENST00000563933 1951 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 U3.9-201ENST00000363823 204 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 RNU6-266P-201ENST00000364225 107 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 SNORA75-201ENST00000384158 137 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CAPN1P07384 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CAPN1P07384 SNORA12-201ENST00000391162 147 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 RNU6-903P-201ENST00000391270 109 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 RNU2-29P-201ENST00000410423 189 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 RNU6-955P-201ENST00000410497 104 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 AP1B1P2-201ENST00000416196 106 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 MTATP6P18-201ENST00000417994 673 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.56□□□□□ -2.16
CAPN1P07384 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.56□□□□□ -2.16
CAPN1P07384 AC016632.1-201ENST00000503994 196 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 ARL2BPP4-201ENST00000506854 471 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 OSBPL9P5-201ENST00000542581 171 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.56□□□□□ -2.16
CAPN1P07384 AL158211.1-201ENST00000566763 763 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 AL391840.1-201ENST00000571144 367 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 AC087752.4-201ENST00000605911 462 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 AC008536.2-201ENST00000607284 349 ntBASIC1.56□□□□□ -2.16
CAPN1P07384 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.56□□□□□ -2.16
CAPN1P07384 MIR378A-201ENST00000362177 66 ntBASIC1.55□□□□□ -2.16
CAPN1P07384 RNU6-552P-201ENST00000362869 119 ntBASIC1.55□□□□□ -2.16
CAPN1P07384 SNORD116-8-201ENST00000384365 95 ntBASIC1.55□□□□□ -2.16
CAPN1P07384 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms