Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC009509.4-201ENST00000619202 509 ntBASIC1.38□□□□□ -2.19
CD74P04233 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.38□□□□□ -2.19
CD74P04233 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CD74P04233 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CD74P04233 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CD74P04233 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CD74P04233 MIR30A-201ENST00000385092 71 ntBASIC1.37□□□□□ -2.19
CD74P04233 SNORD37.1-201ENST00000390968 65 ntBASIC1.37□□□□□ -2.19
CD74P04233 AL606923.1-201ENST00000406616 190 ntBASIC1.37□□□□□ -2.19
CD74P04233 RNU4-55P-201ENST00000410731 137 ntBASIC1.37□□□□□ -2.19
CD74P04233 BX510359.4-201ENST00000423750 193 ntBASIC1.37□□□□□ -2.19
CD74P04233 USP9YP18-201ENST00000425912 695 ntBASIC1.37□□□□□ -2.19
CD74P04233 AC010975.2-201ENST00000427781 588 ntBASIC1.37□□□□□ -2.19
CD74P04233 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.37□□□□□ -2.19
CD74P04233 AL121601.2-201ENST00000438019 707 ntBASIC1.37□□□□□ -2.19
CD74P04233 AL603825.1-201ENST00000438481 80 ntBASIC1.37□□□□□ -2.19
CD74P04233 AC073415.1-201ENST00000449240 153 ntBASIC1.37□□□□□ -2.19
CD74P04233 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.37□□□□□ -2.19
CD74P04233 RNU7-167P-201ENST00000459160 62 ntBASIC1.37□□□□□ -2.19
CD74P04233 AL163973.1-201ENST00000484753 577 ntBASIC1.37□□□□□ -2.19
CD74P04233 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.37□□□□□ -2.19
CD74P04233 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.37□□□□□ -2.19
CD74P04233 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.37□□□□□ -2.19
CD74P04233 MTND3P5-201ENST00000512798 333 ntBASIC1.37□□□□□ -2.19
CD74P04233 AC109479.2-201ENST00000517842 174 ntBASIC1.37□□□□□ -2.19
CD74P04233 AP005660.1-201ENST00000522972 293 ntBASIC1.37□□□□□ -2.19
CD74P04233 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.37□□□□□ -2.19
CD74P04233 AC011494.1-201ENST00000596454 237 ntBASIC1.37□□□□□ -2.19
CD74P04233 CYP2C61P-201ENST00000604072 290 ntBASIC1.37□□□□□ -2.19
CD74P04233 AL132822.1-201ENST00000617063 513 ntBASIC1.37□□□□□ -2.19
CD74P04233 AL353997.5-201ENST00000618886 171 ntBASIC1.37□□□□□ -2.19
CD74P04233 MIR1248-201ENST00000629190 106 ntBASIC1.37□□□□□ -2.19
CD74P04233 SNORD98-201ENST00000636377 67 ntBASIC1.37□□□□□ -2.19
CD74P04233 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.37□□□□□ -2.19
CD74P04233 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CD74P04233 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CD74P04233 MTND5P10-201ENST00000603719 1809 ntBASIC1.36□□□□□ -2.19
CD74P04233 RNU6-1285P-201ENST00000363480 105 ntBASIC1.36□□□□□ -2.19
CD74P04233 Y_RNA.399-201ENST00000383955 105 ntBASIC1.36□□□□□ -2.19
CD74P04233 RNU6-1103P-201ENST00000384150 107 ntBASIC1.36□□□□□ -2.19
CD74P04233 SNORD116-2-201ENST00000384274 95 ntBASIC1.36□□□□□ -2.19
CD74P04233 RNU6-43P-201ENST00000384302 107 ntBASIC1.36□□□□□ -2.19
CD74P04233 SNORD116-6-201ENST00000384711 96 ntBASIC1.36□□□□□ -2.19
CD74P04233 MIR320A-201ENST00000385302 82 ntBASIC1.36□□□□□ -2.19
CD74P04233 RNA5SP219-201ENST00000390940 113 ntBASIC1.36□□□□□ -2.19
CD74P04233 RN7SKP101-201ENST00000411376 320 ntBASIC1.36□□□□□ -2.19
CD74P04233 AL117339.3-201ENST00000418733 162 ntBASIC1.36□□□□□ -2.19
CD74P04233 AL590135.1-201ENST00000422215 156 ntBASIC1.36□□□□□ -2.19
CD74P04233 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.36□□□□□ -2.19
CD74P04233 AC019205.3-201ENST00000424573 156 ntBASIC1.36□□□□□ -2.19
CD74P04233 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.36□□□□□ -2.19
CD74P04233 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.36□□□□□ -2.19
CD74P04233 AC016700.2-201ENST00000446011 156 ntBASIC1.36□□□□□ -2.19
CD74P04233 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.36□□□□□ -2.19
CD74P04233 RNU7-180P-201ENST00000459240 63 ntBASIC1.36□□□□□ -2.19
CD74P04233 AC015911.1-201ENST00000495111 156 ntBASIC1.36□□□□□ -2.19
CD74P04233 AC145146.1-201ENST00000496370 254 ntBASIC1.36□□□□□ -2.19
CD74P04233 CCDC34P1-201ENST00000507441 517 ntBASIC1.36□□□□□ -2.19
CD74P04233 AC108078.1-201ENST00000508073 725 ntBASIC1.36□□□□□ -2.19
CD74P04233 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.36□□□□□ -2.19
CD74P04233 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.36□□□□□ -2.19
CD74P04233 RNU6-1038P-201ENST00000516516 104 ntBASIC1.36□□□□□ -2.19
CD74P04233 AC069113.1-201ENST00000517763 267 ntBASIC1.36□□□□□ -2.19
CD74P04233 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
CD74P04233 MTND4P7-201ENST00000523876 130 ntBASIC1.36□□□□□ -2.19
CD74P04233 AC115990.1-201ENST00000526957 301 ntBASIC1.36□□□□□ -2.19
CD74P04233 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.36□□□□□ -2.19
CD74P04233 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.36□□□□□ -2.19
CD74P04233 AC110588.1-201ENST00000559699 137 ntBASIC1.36□□□□□ -2.19
CD74P04233 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.36□□□□□ -2.19
CD74P04233 AP005136.1-201ENST00000579765 429 ntBASIC1.36□□□□□ -2.19
CD74P04233 AC103987.3-201ENST00000582071 292 ntBASIC1.36□□□□□ -2.19
CD74P04233 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.36□□□□□ -2.19
CD74P04233 AL034555.1-201ENST00000604816 211 ntBASIC1.36□□□□□ -2.19
CD74P04233 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
CD74P04233 AC139792.3-201ENST00000623525 224 ntBASIC1.36□□□□□ -2.19
CD74P04233 AC005609.4-201ENST00000625071 447 ntBASIC1.36□□□□□ -2.19
CD74P04233 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.36□□□□□ -2.19
CD74P04233 RNU4-15P-201ENST00000362613 141 ntBASIC1.35□□□□□ -2.19
CD74P04233 RNA5SP99-201ENST00000364020 114 ntBASIC1.35□□□□□ -2.19
CD74P04233 SNORD116-1-201ENST00000384335 95 ntBASIC1.35□□□□□ -2.19
CD74P04233 RNU6-1119P-201ENST00000384349 108 ntBASIC1.35□□□□□ -2.19
CD74P04233 SNORD73A-201ENST00000386062 65 ntBASIC1.35□□□□□ -2.19
CD74P04233 Y_RNA.582-201ENST00000391023 95 ntBASIC1.35□□□□□ -2.19
CD74P04233 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.35□□□□□ -2.19
CD74P04233 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CD74P04233 AC244670.1-201ENST00000436879 112 ntBASIC1.35□□□□□ -2.19
CD74P04233 RPL7P54-201ENST00000438336 674 ntBASIC1.35□□□□□ -2.19
CD74P04233 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.35□□□□□ -2.19
CD74P04233 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.35□□□□□ -2.19
CD74P04233 RNA5SP57-201ENST00000459463 123 ntBASIC1.35□□□□□ -2.19
CD74P04233 HMGB1P29-201ENST00000505659 499 ntBASIC1.35□□□□□ -2.19
CD74P04233 PTP4A1P4-201ENST00000512479 322 ntBASIC1.35□□□□□ -2.19
CD74P04233 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.35□□□□□ -2.19
CD74P04233 SNORA31.16-201ENST00000516773 139 ntBASIC1.35□□□□□ -2.19
CD74P04233 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.35□□□□□ -2.19
CD74P04233 HSPE1P4-201ENST00000550617 308 ntBASIC1.35□□□□□ -2.19
CD74P04233 TRAV32-201ENST00000553993 340 ntBASIC1.35□□□□□ -2.19
CD74P04233 MTCO3P23-201ENST00000561363 289 ntBASIC1.35□□□□□ -2.19
CD74P04233 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms