Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFAP04085 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.94□□□□□ -1.78
PDGFAP04085 AC084757.4-201ENST00000616350 526 ntBASIC3.94□□□□□ -1.78
PDGFAP04085 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.94□□□□□ -1.78
PDGFAP04085 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFAP04085 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFAP04085 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFAP04085 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.93□□□□□ -1.78
PDGFAP04085 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFAP04085 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFAP04085 Y_RNA.23-201ENST00000362496 106 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 RNA5SP175-201ENST00000364275 119 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 Y_RNA.243-201ENST00000364481 109 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 SNORD116-18-201ENST00000383961 92 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 BMS1P22-201ENST00000414726 313 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 GOT2P5-201ENST00000433995 546 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.93□□□□□ -1.78
PDGFAP04085 RPS20P10-201ENST00000451209 253 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 AL031183.1-201ENST00000457667 207 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 RPS27AP9-201ENST00000477681 438 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 SRIP1-201ENST00000489235 288 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 RN7SL812P-201ENST00000493791 279 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 AC005840.1-201ENST00000498412 377 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.93□□□□□ -1.78
PDGFAP04085 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.93□□□□□ -1.78
PDGFAP04085 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.93□□□□□ -1.78
PDGFAP04085 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.93□□□□□ -1.78
PDGFAP04085 AL713866.2-201ENST00000603579 219 ntBASIC3.93□□□□□ -1.78
PDGFAP04085 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFAP04085 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFAP04085 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PDGFAP04085 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFAP04085 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFAP04085 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFAP04085 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.93□□□□□ -1.78
PDGFAP04085 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PDGFAP04085 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PDGFAP04085 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFAP04085 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFAP04085 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFAP04085 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFAP04085 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFAP04085 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFAP04085 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFAP04085 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.92□□□□□ -1.78
PDGFAP04085 Y_RNA.75-201ENST00000362927 97 ntBASIC3.92□□□□□ -1.78
PDGFAP04085 Y_RNA.182-201ENST00000363880 111 ntBASIC3.92□□□□□ -1.78
PDGFAP04085 Y_RNA.287-201ENST00000364853 94 ntBASIC3.92□□□□□ -1.78
PDGFAP04085 Y_RNA.357-201ENST00000365487 109 ntBASIC3.92□□□□□ -1.78
PDGFAP04085 RNU1-63P-201ENST00000383902 164 ntBASIC3.92□□□□□ -1.78
PDGFAP04085 U8.19-201ENST00000459095 133 ntBASIC3.92□□□□□ -1.78
PDGFAP04085 AC100767.1-201ENST00000528178 123 ntBASIC3.92□□□□□ -1.78
PDGFAP04085 AL160290.3-201ENST00000604869 165 ntBASIC3.92□□□□□ -1.78
PDGFAP04085 AC008873.1-201ENST00000625051 138 ntBASIC3.92□□□□□ -1.78
PDGFAP04085 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFAP04085 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFAP04085 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.92□□□□□ -1.78
PDGFAP04085 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.92□□□□□ -1.78
PDGFAP04085 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PDGFAP04085 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDGFAP04085 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFAP04085 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.91□□□□□ -1.78
PDGFAP04085 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFAP04085 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFAP04085 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
PDGFAP04085 RNA5SP322-201ENST00000363617 119 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 RNU6-801P-201ENST00000364087 105 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 RNA5SP22-201ENST00000365393 109 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 RNA5SP151-201ENST00000365632 117 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 RNU6-449P-201ENST00000383914 107 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 Y_RNA.412-201ENST00000384001 104 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 SNORA67.2-201ENST00000384300 149 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 SNORA11.1-201ENST00000408133 129 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 RNA5SP306-201ENST00000411087 107 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PDGFAP04085 AC097463.2-201ENST00000421074 142 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 HMGN2P31-201ENST00000432430 273 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.91□□□□□ -1.78
PDGFAP04085 AC006504.1-201ENST00000562493 3666 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFAP04085 AC010329.5-201ENST00000623497 2174 ntBASIC3.91□□□□□ -1.78
PDGFAP04085 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.91□□□□□ -1.78
PDGFAP04085 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFAP04085 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.91□□□□□ -1.78
PDGFAP04085 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDGFAP04085 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PDGFAP04085 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PDGFAP04085 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PDGFAP04085 OTUD4P1-201ENST00000237841 3067 ntBASIC3.9□□□□□ -1.78
PDGFAP04085 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.9□□□□□ -1.78
PDGFAP04085 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.9□□□□□ -1.78
PDGFAP04085 U1.1-201ENST00000384101 164 ntBASIC3.9□□□□□ -1.79
PDGFAP04085 RNU1-89P-201ENST00000384592 164 ntBASIC3.9□□□□□ -1.79
PDGFAP04085 RN7SKP167-201ENST00000411047 285 ntBASIC3.9□□□□□ -1.79
PDGFAP04085 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFAP04085 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFAP04085 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFAP04085 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms