Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU4-77P-201ENST00000516692 156 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 RNU6-685P-201ENST00000517088 95 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.42□□□□□ -2.02
COL2A1P02458 IGHV3-76-201ENST00000522465 295 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 AC131281.1-201ENST00000522984 164 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 AP006587.4-201ENST00000526053 529 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.42□□□□□ -2.02
COL2A1P02458 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.42□□□□□ -2.02
COL2A1P02458 ZNF192P1-203ENST00000565888 810 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.42□□□□□ -2.02
COL2A1P02458 MTND4LP5-201ENST00000605152 292 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 AC062037.2-201ENST00000610137 73 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 AL161423.1-201ENST00000613700 262 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 SNHG22-203ENST00000617833 660 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
COL2A1P02458 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
COL2A1P02458 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.41□□□□□ -2.02
COL2A1P02458 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL2A1P02458 Y_RNA.447-201ENST00000384184 113 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 RNU6-339P-201ENST00000384310 107 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 RNU6-434P-201ENST00000384376 107 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 RNU6-1026P-201ENST00000384465 108 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 SNORA26.7-201ENST00000391288 122 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.41□□□□□ -2.02
COL2A1P02458 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.41□□□□□ -2.02
COL2A1P02458 RPL35AP22-201ENST00000436855 335 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.41□□□□□ -2.02
COL2A1P02458 RNU7-167P-201ENST00000459160 62 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 RPL21P103-201ENST00000479921 488 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 FO393415.2-201ENST00000480085 343 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.41□□□□□ -2.02
COL2A1P02458 MTND3P25-201ENST00000509243 135 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 AC096745.1-201ENST00000509945 370 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.41□□□□□ -2.02
COL2A1P02458 RNU6-397P-201ENST00000516226 104 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 HMGN1P28-201ENST00000521340 364 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.41□□□□□ -2.02
COL2A1P02458 AC125232.2-201ENST00000592457 143 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 ELOCP5-201ENST00000604924 333 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 AP001486.3-201ENST00000615334 372 ntBASIC2.41□□□□□ -2.02
COL2A1P02458 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
COL2A1P02458 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
COL2A1P02458 MIR378A-201ENST00000362177 66 ntBASIC2.4□□□□□ -2.02
COL2A1P02458 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.4□□□□□ -2.02
COL2A1P02458 MIR517A-201ENST00000385001 87 ntBASIC2.4□□□□□ -2.02
COL2A1P02458 MT-TW-201ENST00000387382 68 ntBASIC2.4□□□□□ -2.02
COL2A1P02458 HSPE1P26-201ENST00000405341 275 ntBASIC2.4□□□□□ -2.02
COL2A1P02458 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.4□□□□□ -2.02
COL2A1P02458 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
COL2A1P02458 HMGB1P35-201ENST00000503360 598 ntBASIC2.4□□□□□ -2.02
COL2A1P02458 HMGB3P17-201ENST00000504195 649 ntBASIC2.4□□□□□ -2.02
COL2A1P02458 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.4□□□□□ -2.02
COL2A1P02458 RNY3P15-201ENST00000516297 97 ntBASIC2.4□□□□□ -2.02
COL2A1P02458 AC022790.1-201ENST00000522872 204 ntBASIC2.4□□□□□ -2.02
COL2A1P02458 AMZ2P1-203ENST00000565833 850 ntBASIC2.4□□□□□ -2.02
COL2A1P02458 RNU6-85P-201ENST00000605989 107 ntBASIC2.4□□□□□ -2.02
COL2A1P02458 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.4□□□□□ -2.03
COL2A1P02458 AC010680.1-201ENST00000590024 3590 ntBASIC2.4□□□□□ -2.03
COL2A1P02458 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.4□□□□□ -2.03
COL2A1P02458 Y_RNA.257-201ENST00000364596 102 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 RNU6-45P-201ENST00000384471 107 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 MT-TG-201ENST00000387429 68 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 RNU4-65P-201ENST00000410473 140 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 USMG5P1-201ENST00000425964 177 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.39□□□□□ -2.03
COL2A1P02458 AC009237.8-201ENST00000445492 379 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.39□□□□□ -2.03
COL2A1P02458 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.39□□□□□ -2.03
COL2A1P02458 SNORD5.1-201ENST00000458800 75 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.39□□□□□ -2.03
COL2A1P02458 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.39□□□□□ -2.03
COL2A1P02458 MIR3128-201ENST00000581957 66 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.39□□□□□ -2.03
COL2A1P02458 MIR1244-1-201ENST00000612829 85 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 AL359547.2-201ENST00000615810 418 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 MIR1244-3-201ENST00000635744 85 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 MIR1244-2-201ENST00000636449 85 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 MIR1244-4-202ENST00000636813 85 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
COL2A1P02458 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
COL2A1P02458 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.39□□□□□ -2.03
COL2A1P02458 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
COL2A1P02458 RNU6-1284P-201ENST00000363701 100 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 RNU6-214P-201ENST00000384130 107 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 Y_RNA.483-201ENST00000384380 101 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 RNU6-790P-201ENST00000384479 105 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 RNU6-1156P-201ENST00000410365 100 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.39□□□□□ -2.03
COL2A1P02458 ELOCP20-201ENST00000422460 345 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.39□□□□□ -2.03
COL2A1P02458 AL591212.2-201ENST00000433923 257 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 MTND5P15-201ENST00000434246 349 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 OSTCP8-201ENST00000445117 448 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.39□□□□□ -2.03
COL2A1P02458 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.39□□□□□ -2.03
COL2A1P02458 RNU6-570P-201ENST00000517051 105 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms