Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TRBVB-201ENST00000477100 408 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.55□□□□□ -2.32
COL1A1P02452 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.55□□□□□ -2.32
COL1A1P02452 AC023050.2-201ENST00000544968 387 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 EIF4A1P12-201ENST00000551910 141 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 MTCYBP33-201ENST00000575007 1130 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 MIR5094-201ENST00000578766 85 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 MIR4802-201ENST00000581881 80 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 HMGN1P30-201ENST00000589286 268 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 AL022154.1-201ENST00000604698 785 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.55□□□□□ -2.32
COL1A1P02452 AL590240.4-201ENST00000616908 390 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 LINC02555-201ENST00000563933 1951 ntBASIC0.55□□□□□ -2.32
COL1A1P02452 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
COL1A1P02452 RNY4P24-201ENST00000362735 96 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 SNORD56.1-201ENST00000362913 68 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 RNU4-67P-201ENST00000364569 141 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 RNU6-723P-201ENST00000383973 107 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 SNORA50A-201ENST00000384225 134 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
COL1A1P02452 AC006461.1-201ENST00000412637 326 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 RPL23AP30-201ENST00000432419 501 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.54□□□□□ -2.32
COL1A1P02452 AC130509.1-201ENST00000464158 433 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.54□□□□□ -2.32
COL1A1P02452 AC119751.4-201ENST00000507498 357 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 PSMC1P5-201ENST00000512850 177 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 RNU6-322P-201ENST00000516010 103 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.54□□□□□ -2.32
COL1A1P02452 AC068587.4-201ENST00000533893 186 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.54□□□□□ -2.32
COL1A1P02452 HMGB1P33-201ENST00000563485 527 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AP003465.2-201ENST00000602571 373 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.54□□□□□ -2.32
COL1A1P02452 AL359547.2-201ENST00000615810 418 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 SCARNA4-202ENST00000625402 129 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 Y_RNA.332-201ENST00000365271 113 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 SNORA75B-201ENST00000384053 137 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 Y_RNA.465-201ENST00000384293 102 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 MIR520A-201ENST00000384862 85 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 MIR10A-201ENST00000385043 110 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 RNU2-64P-201ENST00000411315 191 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.54□□□□□ -2.32
COL1A1P02452 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.54□□□□□ -2.32
COL1A1P02452 TXNL1P1-201ENST00000429528 554 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.54□□□□□ -2.32
COL1A1P02452 MTND2P4-201ENST00000445034 1004 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AC145146.1-201ENST00000496370 254 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AC079140.3-201ENST00000511111 550 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 SNORA43.2-201ENST00000516652 128 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 RN7SKP88-201ENST00000516847 250 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.54□□□□□ -2.32
COL1A1P02452 AL512310.8-201ENST00000550183 120 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.54□□□□□ -2.32
COL1A1P02452 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
COL1A1P02452 7SK.8-201ENST00000612110 250 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 7SK.11-201ENST00000615477 250 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 7SK.13-201ENST00000622040 250 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 AC120349.3-201ENST00000624377 529 ntBASIC0.54□□□□□ -2.32
COL1A1P02452 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
COL1A1P02452 Y_RNA.472-201ENST00000384322 102 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 RNU6-769P-201ENST00000384407 104 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 MIR100-201ENST00000385259 80 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 RPS3AP36-201ENST00000398190 775 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.53□□□□□ -2.33
COL1A1P02452 AC123900.1-201ENST00000420390 96 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 LARP1BP3-201ENST00000437229 869 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 AL117351.1-201ENST00000438864 766 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 AL122001.1-201ENST00000457027 370 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.53□□□□□ -2.33
COL1A1P02452 HMGN2P9-201ENST00000476875 229 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.53□□□□□ -2.33
COL1A1P02452 TRBVA-201ENST00000498804 316 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 AC016550.1-201ENST00000505348 785 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 AC097473.1-201ENST00000508142 408 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 SNORA3.4-201ENST00000515969 96 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 RNU5F-2P-201ENST00000516066 82 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.53□□□□□ -2.33
COL1A1P02452 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.53□□□□□ -2.33
COL1A1P02452 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.53□□□□□ -2.33
COL1A1P02452 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.53□□□□□ -2.33
COL1A1P02452 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 AL136363.2-201ENST00000604173 851 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.53□□□□□ -2.33
COL1A1P02452 Y_RNA.192-201ENST00000363977 102 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 RNU6-438P-201ENST00000365561 103 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AL136310.1-201ENST00000404926 654 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.52□□□□□ -2.33
COL1A1P02452 AC092809.3-201ENST00000415453 231 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 Z95118.1-201ENST00000421372 247 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AL008629.1-201ENST00000438615 184 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 RPS27AP8-201ENST00000452665 445 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 RPL31P3-201ENST00000458430 332 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AC134050.1-201ENST00000495088 933 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AC005741.1-201ENST00000511094 432 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 Y_RNA.687-201ENST00000516558 91 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AC010376.1-201ENST00000522101 334 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
COL1A1P02452 AC115990.1-201ENST00000526957 301 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms