Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RNU6-89P-201ENST00000606519 100 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 MIR6840-201ENST00000611937 71 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 DISC2.1-201ENST00000612827 205 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 AC121333.1-201ENST00000567488 2709 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.26□□□□□ -2.05
GGPS1O95749 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
GGPS1O95749 MTND4P1-201ENST00000457501 1466 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 AC009487.4-201ENST00000624969 3585 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 ZNF355P-201ENST00000427301 3216 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
GGPS1O95749 SNORA40.19-201ENST00000390846 128 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 EIF4E2P1-201ENST00000393781 255 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.25□□□□□ -2.05
GGPS1O95749 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
GGPS1O95749 ERLEC1P1-201ENST00000433806 578 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.25□□□□□ -2.05
GGPS1O95749 AL021397.1-201ENST00000451806 248 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.25□□□□□ -2.05
GGPS1O95749 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.25□□□□□ -2.05
GGPS1O95749 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.25□□□□□ -2.05
GGPS1O95749 PRELID3BP1-201ENST00000457142 540 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 RNU6-1037P-201ENST00000459571 107 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 AC091874.1-201ENST00000511402 339 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 RNU6-314P-201ENST00000516574 104 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 AC025423.5-201ENST00000550230 219 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 TRAV32-201ENST00000553993 340 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 EIF1P4-201ENST00000572664 335 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 AC007229.1-201ENST00000590455 412 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 AC078899.2-201ENST00000595282 212 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 FER-210ENST00000628534 558 ntTSL 5 BASIC2.25□□□□□ -2.05
GGPS1O95749 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
GGPS1O95749 AP000553.5-201ENST00000641933 54 ntBASIC2.25□□□□□ -2.05
GGPS1O95749 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.24□□□□□ -2.05
GGPS1O95749 RNA5SP99-201ENST00000364020 114 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 SNORD32B-201ENST00000364460 84 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 RNU4-56P-201ENST00000364700 142 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 RNU6-1329P-201ENST00000365664 107 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 SNORD116-4-201ENST00000384733 96 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 MIR181A1-201ENST00000385026 110 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 SNORA46.1-201ENST00000391069 153 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 AL590002.1-201ENST00000406554 418 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 AL589823.1-201ENST00000429577 183 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 AL359672.1-201ENST00000442302 409 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 HMGN2P23-201ENST00000456759 269 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.24□□□□□ -2.05
GGPS1O95749 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.24□□□□□ -2.05
GGPS1O95749 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.24□□□□□ -2.05
GGPS1O95749 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.24□□□□□ -2.05
GGPS1O95749 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.24□□□□□ -2.05
GGPS1O95749 BNIP3P25-201ENST00000596023 559 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 AF250324.2-201ENST00000608299 610 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 AC064836.2-201ENST00000609491 462 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 AC068944.2-201ENST00000610373 403 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 MIR6845-201ENST00000613182 61 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.24□□□□□ -2.05
GGPS1O95749 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 MIR1321-201ENST00000637766 79 ntBASIC2.24□□□□□ -2.05
GGPS1O95749 MTND4P23-201ENST00000447723 1363 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
GGPS1O95749 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
GGPS1O95749 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
GGPS1O95749 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
GGPS1O95749 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
GGPS1O95749 MIR518A2-201ENST00000384966 87 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 AC019129.1-201ENST00000403786 261 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 MTCYBP2-201ENST00000407745 171 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 MIR1294-201ENST00000408503 142 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 SRIP3-201ENST00000413200 219 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 MTND1P23-201ENST00000416931 372 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.23□□□□□ -2.05
GGPS1O95749 RPL23AP7-203ENST00000449021 469 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 RPL39P5-202ENST00000512505 151 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 RNU6-720P-201ENST00000516363 108 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 AC007375.1-201ENST00000554513 578 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 MIR5089-201ENST00000580047 84 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 AC010525.2-201ENST00000590920 195 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 AC011494.1-201ENST00000596454 237 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 SNRPGP19-201ENST00000603826 189 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 AC004492.1-201ENST00000607036 742 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.23□□□□□ -2.05
GGPS1O95749 MIR1248-201ENST00000629190 106 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 SNORA43.4-201ENST00000629559 138 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 AL450472.1-202ENST00000637286 180 ntBASIC2.23□□□□□ -2.05
GGPS1O95749 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
GGPS1O95749 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
GGPS1O95749 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
GGPS1O95749 RNU6-451P-201ENST00000362921 107 ntBASIC2.22□□□□□ -2.05
GGPS1O95749 RNY3P3-201ENST00000363816 102 ntBASIC2.22□□□□□ -2.05
GGPS1O95749 MIR583-201ENST00000384846 75 ntBASIC2.22□□□□□ -2.05
GGPS1O95749 MIR29C-201ENST00000385231 88 ntBASIC2.22□□□□□ -2.05
GGPS1O95749 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
GGPS1O95749 SNORA12-201ENST00000391162 147 ntBASIC2.22□□□□□ -2.05
GGPS1O95749 MIR1262-201ENST00000408276 93 ntBASIC2.22□□□□□ -2.05
GGPS1O95749 RNA5SP201-201ENST00000410316 124 ntBASIC2.22□□□□□ -2.05
GGPS1O95749 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.22□□□□□ -2.05
GGPS1O95749 Y_RNA.638-201ENST00000459374 113 ntBASIC2.22□□□□□ -2.05
GGPS1O95749 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms