Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 AC015911.1-201ENST00000495111 156 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AC005741.1-201ENST00000511094 432 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AC010486.3-201ENST00000511602 785 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UPK3AO75631 RN7SKP298-201ENST00000515950 94 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 RNA5SP490-201ENST00000517141 136 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK3AO75631 AL356057.1-201ENST00000533798 831 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 HSPE1P4-201ENST00000550617 308 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AC015712.3-201ENST00000559380 164 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 MTCO3P23-201ENST00000561363 289 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK3AO75631 AC110760.3-201ENST00000598794 467 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 AC010900.2-201ENST00000604508 210 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 U2.17-201ENST00000611454 95 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UPK3AO75631 AP000560.1-201ENST00000624150 1937 ntBASIC1.54□□□□□ -2.16
UPK3AO75631 RNU6-661P-201ENST00000362409 107 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 Y_RNA.296-201ENST00000364930 108 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 RNU6-996P-201ENST00000365438 107 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
UPK3AO75631 Y_RNA.399-201ENST00000383955 105 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 RNU6-142P-201ENST00000384019 107 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 RNU5A-6P-201ENST00000384136 116 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
UPK3AO75631 SNORA26.9-201ENST00000391322 122 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK3AO75631 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK3AO75631 AC010424.1-201ENST00000506336 297 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 SNORA31.16-201ENST00000516773 139 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK3AO75631 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
UPK3AO75631 AC104581.2-201ENST00000572227 430 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 MIR3122-201ENST00000577243 73 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 AC005786.1-201ENST00000588553 154 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 AC004223.2-201ENST00000590309 544 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 AL391646.1-201ENST00000603860 190 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 RNU6-85P-201ENST00000605989 107 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 AC025754.2-201ENST00000606491 432 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 AP001596.2-201ENST00000608410 312 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK3AO75631 AC007684.1-201ENST00000609671 477 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 AL354950.2-201ENST00000617939 290 ntBASIC1.53□□□□□ -2.16
UPK3AO75631 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UPK3AO75631 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
UPK3AO75631 MIR126-201ENST00000362291 85 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 SNORD32B-201ENST00000364460 84 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 Y_RNA.359-201ENST00000365498 102 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK3AO75631 RPS29P13-201ENST00000402041 169 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK3AO75631 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK3AO75631 AC002486.1-201ENST00000435098 391 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 HMGB1P18-201ENST00000438801 619 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 AC073415.1-201ENST00000449240 153 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 HMGN2P23-201ENST00000456759 269 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK3AO75631 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK3AO75631 RNU6-250P-201ENST00000516958 103 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 COPS8P3-201ENST00000526024 482 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK3AO75631 AC006362.1-201ENST00000567392 174 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK3AO75631 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK3AO75631 uc_338.34-201ENST00000617467 174 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 AC005609.4-201ENST00000625071 447 ntBASIC1.52□□□□□ -2.17
UPK3AO75631 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK3AO75631 Y_RNA.77-201ENST00000362962 107 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 SNORD32A-201ENST00000364805 84 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
UPK3AO75631 RNU6-26P-201ENST00000383985 107 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 AL606923.1-201ENST00000406616 190 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 RNA5SP100-201ENST00000410903 110 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 RNA5SP59-201ENST00000410922 110 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK3AO75631 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.51□□□□□ -2.17
UPK3AO75631 MTCO2P19-201ENST00000427513 598 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 SNAP23P1-201ENST00000433229 246 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 MTCO2P16-201ENST00000436962 677 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.51□□□□□ -2.17
UPK3AO75631 RNU1-131P-201ENST00000458943 161 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 RNU7-180P-201ENST00000459240 63 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 MTND4P7-201ENST00000523876 130 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.51□□□□□ -2.17
UPK3AO75631 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.51□□□□□ -2.17
UPK3AO75631 MIR3169-201ENST00000578032 83 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 MIR3941-201ENST00000582572 103 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 AC016925.2-201ENST00000605108 242 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 AL590240.4-201ENST00000616908 390 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.51□□□□□ -2.17
UPK3AO75631 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK3AO75631 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
UPK3AO75631 AC090582.1-201ENST00000636321 199 ntBASIC1.51□□□□□ -2.17
UPK3AO75631 AC245060.5-201ENST00000610778 3293 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms