Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC136932.1-201ENST00000574771 208 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.07□□□□□ -1.76
GRIN3BO60391 MIR486-1-201ENST00000612171 68 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 HAUS6P2-201ENST00000433254 2404 ntBASIC4.07□□□□□ -1.76
GRIN3BO60391 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
GRIN3BO60391 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.07□□□□□ -1.76
GRIN3BO60391 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GRIN3BO60391 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.07□□□□□ -1.76
GRIN3BO60391 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.06□□□□□ -1.76
GRIN3BO60391 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GRIN3BO60391 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.06□□□□□ -1.76
GRIN3BO60391 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.06□□□□□ -1.76
GRIN3BO60391 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
GRIN3BO60391 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GRIN3BO60391 snoU2_19.2-201ENST00000363024 80 ntBASIC4.06□□□□□ -1.76
GRIN3BO60391 RNU6-270P-201ENST00000364131 105 ntBASIC4.06□□□□□ -1.76
GRIN3BO60391 FTH1P15-201ENST00000406984 280 ntBASIC4.06□□□□□ -1.76
GRIN3BO60391 AL139109.1-201ENST00000455491 297 ntBASIC4.06□□□□□ -1.76
GRIN3BO60391 RPL26P9-201ENST00000457466 433 ntBASIC4.06□□□□□ -1.76
GRIN3BO60391 Y_RNA.676-201ENST00000516393 96 ntBASIC4.06□□□□□ -1.76
GRIN3BO60391 MIR4319-201ENST00000577285 85 ntBASIC4.06□□□□□ -1.76
GRIN3BO60391 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.06□□□□□ -1.76
GRIN3BO60391 AC240442.1-201ENST00000616055 283 ntBASIC4.06□□□□□ -1.76
GRIN3BO60391 SNORA43.4-201ENST00000629559 138 ntBASIC4.06□□□□□ -1.76
GRIN3BO60391 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.06□□□□□ -1.76
GRIN3BO60391 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.06□□□□□ -1.76
GRIN3BO60391 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.06□□□□□ -1.76
GRIN3BO60391 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.06□□□□□ -1.76
GRIN3BO60391 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.06□□□□□ -1.76
GRIN3BO60391 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.06□□□□□ -1.76
GRIN3BO60391 AC110491.1-201ENST00000562191 2010 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.05□□□□□ -1.76
GRIN3BO60391 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GRIN3BO60391 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
GRIN3BO60391 FAM35DP-201ENST00000323387 2712 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 SNORD56.1-201ENST00000362913 68 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 RNU5B-2P-201ENST00000363036 113 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 SNORA29-201ENST00000384183 140 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.05□□□□□ -1.76
GRIN3BO60391 EEF1A1P41-201ENST00000414667 207 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 BPY2DP-201ENST00000422208 265 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.05□□□□□ -1.76
GRIN3BO60391 AC087477.1-201ENST00000465747 340 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 AP002884.2-201ENST00000471647 395 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 AC091874.1-201ENST00000511402 339 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 RNU1-41P-201ENST00000516161 162 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 RNU1-48P-201ENST00000516400 162 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 MIR5571-201ENST00000577998 113 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 BRDTP1-201ENST00000605735 677 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.05□□□□□ -1.76
GRIN3BO60391 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
GRIN3BO60391 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
GRIN3BO60391 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.05□□□□□ -1.76
GRIN3BO60391 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.05□□□□□ -1.76
GRIN3BO60391 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GRIN3BO60391 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
GRIN3BO60391 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GRIN3BO60391 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.04□□□□□ -1.76
GRIN3BO60391 AC073073.2-201ENST00000609827 2578 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 AL391987.6-201ENST00000305671 199 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 RNU6-137P-201ENST00000363680 108 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 RNU6-1141P-201ENST00000364520 107 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 RNU6-1280P-201ENST00000365211 107 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 SNORD6-201ENST00000365444 73 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 RNU6-1027P-201ENST00000383998 107 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 SNORA1.3-201ENST00000384676 136 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 MIR32-201ENST00000384965 70 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 RNA5SP213-201ENST00000391031 106 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 RN7SKP61-201ENST00000410642 295 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 AL139156.1-201ENST00000412785 841 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 AC099548.1-201ENST00000421443 426 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 snoU13.26-201ENST00000459452 105 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.04□□□□□ -1.76
GRIN3BO60391 RNU6-1114P-201ENST00000516022 107 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 RNU6-928P-201ENST00000516876 104 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 RN7SKP209-201ENST00000516888 304 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 SNORA31.23-201ENST00000517219 133 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 CKS1BP7-201ENST00000522230 235 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 AL391261.3-201ENST00000557194 520 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.04□□□□□ -1.76
GRIN3BO60391 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.04□□□□□ -1.76
GRIN3BO60391 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.04□□□□□ -1.76
GRIN3BO60391 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.04□□□□□ -1.76
GRIN3BO60391 AC009163.5-201ENST00000575421 637 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 AC073410.2-201ENST00000603240 332 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GRIN3BO60391 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.04□□□□□ -1.76
GRIN3BO60391 AC002546.1-201ENST00000588041 2504 ntBASIC4.04□□□□□ -1.76
GRIN3BO60391 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
GRIN3BO60391 RNU6-222P-201ENST00000362438 107 ntBASIC4.03□□□□□ -1.76
GRIN3BO60391 SNORA71.1-201ENST00000364523 117 ntBASIC4.03□□□□□ -1.76
GRIN3BO60391 RNU6-487P-201ENST00000365430 104 ntBASIC4.03□□□□□ -1.76
GRIN3BO60391 MIR215-201ENST00000384858 110 ntBASIC4.03□□□□□ -1.76
GRIN3BO60391 Y_RNA.581-201ENST00000391017 97 ntBASIC4.03□□□□□ -1.76
GRIN3BO60391 AL079342.1-201ENST00000401460 267 ntBASIC4.03□□□□□ -1.76
GRIN3BO60391 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.03□□□□□ -1.76
GRIN3BO60391 AC016700.2-201ENST00000446011 156 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms