Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ACTN4O43707 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.77□□□□□ -1.65
ACTN4O43707 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
ACTN4O43707 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ACTN4O43707 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ACTN4O43707 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ACTN4O43707 AC025031.4-201ENST00000621248 3271 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ACTN4O43707 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ACTN4O43707 RNA5SP388-201ENST00000362584 119 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 RNU6-640P-201ENST00000363693 105 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 RNU6-309P-201ENST00000364573 106 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 U8.12-201ENST00000384701 133 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 RNU2-55P-201ENST00000411146 174 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.76□□□□□ -1.65
ACTN4O43707 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 AL358232.1-201ENST00000448030 501 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 RN7SL585P-201ENST00000470538 280 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.76□□□□□ -1.65
ACTN4O43707 RNU6-1299P-201ENST00000516316 100 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.76□□□□□ -1.65
ACTN4O43707 POLR3GP1-201ENST00000594073 261 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 AP003357.1-201ENST00000604497 148 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ACTN4O43707 AL596211.1-201ENST00000569873 2277 ntBASIC4.76□□□□□ -1.65
ACTN4O43707 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ACTN4O43707 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
ACTN4O43707 MFSD8-242ENST00000641690 4199 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 FAM35BP-202ENST00000497389 3337 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.75□□□□□ -1.65
ACTN4O43707 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ACTN4O43707 RNU6-1131P-201ENST00000364955 107 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 SNORA37-201ENST00000384504 129 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 MIR548B-201ENST00000385247 97 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 RN7SKP101-201ENST00000411376 320 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.75□□□□□ -1.65
ACTN4O43707 PHBP16-201ENST00000446318 950 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 SNORD108-201ENST00000459332 71 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 RNU6-437P-201ENST00000459408 95 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 AC010469.1-201ENST00000463864 576 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 RNA5SP73-201ENST00000516744 108 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 RNU6-762P-201ENST00000517107 102 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.75□□□□□ -1.65
ACTN4O43707 AP003327.1-201ENST00000529684 127 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.75□□□□□ -1.65
ACTN4O43707 AL160236.1-201ENST00000556317 195 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.75□□□□□ -1.65
ACTN4O43707 MIR4715-201ENST00000584117 79 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 AL137843.1-201ENST00000605078 385 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 RMST_8.1-201ENST00000610287 165 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 AC010300.1-201ENST00000600671 5134 ntBASIC4.75□□□□□ -1.65
ACTN4O43707 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
ACTN4O43707 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
ACTN4O43707 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
ACTN4O43707 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ACTN4O43707 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
ACTN4O43707 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
ACTN4O43707 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.75□□□□□ -1.65
ACTN4O43707 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN4O43707 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.74□□□□□ -1.65
ACTN4O43707 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ACTN4O43707 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.74□□□□□ -1.65
ACTN4O43707 RNU6-508P-201ENST00000363231 103 ntBASIC4.74□□□□□ -1.65
ACTN4O43707 RNU4-41P-201ENST00000364426 143 ntBASIC4.74□□□□□ -1.65
ACTN4O43707 AC069285.2-201ENST00000440210 275 ntBASIC4.74□□□□□ -1.65
ACTN4O43707 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.74□□□□□ -1.65
ACTN4O43707 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.74□□□□□ -1.65
ACTN4O43707 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.74□□□□□ -1.65
ACTN4O43707 RPL23AP54-201ENST00000495129 419 ntBASIC4.74□□□□□ -1.65
ACTN4O43707 VWA8P1-201ENST00000510889 176 ntBASIC4.74□□□□□ -1.65
ACTN4O43707 HSPE1P5-201ENST00000561489 272 ntBASIC4.74□□□□□ -1.65
ACTN4O43707 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.74□□□□□ -1.65
ACTN4O43707 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ACTN4O43707 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN4O43707 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN4O43707 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
ACTN4O43707 A2MP1-204ENST00000566278 4130 ntBASIC4.74□□□□□ -1.65
ACTN4O43707 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.73□□□□□ -1.65
ACTN4O43707 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.73□□□□□ -1.65
ACTN4O43707 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ACTN4O43707 RNU6-766P-201ENST00000362478 107 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 RNU1-14P-201ENST00000362759 152 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 Y_RNA.124-201ENST00000363339 93 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 RNU6-484P-201ENST00000384016 107 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 RNU6-1323P-201ENST00000384025 107 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 SNORA67.2-201ENST00000384300 149 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 MIR1179-201ENST00000408703 91 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.73□□□□□ -1.65
ACTN4O43707 RN7SL810P-201ENST00000493031 276 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 RNU6-638P-201ENST00000516582 104 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 AC018630.3-201ENST00000542637 96 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.73□□□□□ -1.65
ACTN4O43707 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.73□□□□□ -1.65
ACTN4O43707 AP001318.4-201ENST00000616637 121 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.73□□□□□ -1.65
ACTN4O43707 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.73□□□□□ -1.65
ACTN4O43707 AC016588.2-201ENST00000632484 3021 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ACTN4O43707 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ACTN4O43707 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms