Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RNU6-191P-201ENST00000516295 94 ntBASIC3.47□□□□□ -1.85
SHOXO15266 AC008011.1-201ENST00000545989 227 ntBASIC3.47□□□□□ -1.85
SHOXO15266 TGIF1P1-201ENST00000558095 802 ntBASIC3.47□□□□□ -1.85
SHOXO15266 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.47□□□□□ -1.85
SHOXO15266 MIR5006-201ENST00000583027 110 ntBASIC3.47□□□□□ -1.85
SHOXO15266 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.47□□□□□ -1.85
SHOXO15266 AC113403.1-201ENST00000604910 193 ntBASIC3.47□□□□□ -1.85
SHOXO15266 AC068205.3-201ENST00000636385 468 ntBASIC3.47□□□□□ -1.85
SHOXO15266 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHOXO15266 IPO8P1-201ENST00000455509 3109 ntBASIC3.47□□□□□ -1.85
SHOXO15266 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
SHOXO15266 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
SHOXO15266 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SHOXO15266 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.46□□□□□ -1.86
SHOXO15266 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHOXO15266 RNU6-682P-201ENST00000363843 106 ntBASIC3.46□□□□□ -1.86
SHOXO15266 SNORA70.2-201ENST00000364506 135 ntBASIC3.46□□□□□ -1.86
SHOXO15266 Y_RNA.262-201ENST00000364641 102 ntBASIC3.46□□□□□ -1.86
SHOXO15266 Y_RNA.415-201ENST00000384012 112 ntBASIC3.46□□□□□ -1.86
SHOXO15266 MIR1179-201ENST00000408703 91 ntBASIC3.46□□□□□ -1.86
SHOXO15266 RNU6-651P-201ENST00000411040 105 ntBASIC3.46□□□□□ -1.86
SHOXO15266 AC009963.1-201ENST00000417265 157 ntBASIC3.46□□□□□ -1.86
SHOXO15266 RPEP3-201ENST00000425462 676 ntBASIC3.46□□□□□ -1.86
SHOXO15266 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.46□□□□□ -1.86
SHOXO15266 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.46□□□□□ -1.86
SHOXO15266 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.46□□□□□ -1.86
SHOXO15266 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.46□□□□□ -1.86
SHOXO15266 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.46□□□□□ -1.86
SHOXO15266 RNU6-861P-201ENST00000516745 106 ntBASIC3.46□□□□□ -1.86
SHOXO15266 AC006064.5-201ENST00000541782 248 ntBASIC3.46□□□□□ -1.86
SHOXO15266 MIR4474-201ENST00000579189 78 ntBASIC3.46□□□□□ -1.86
SHOXO15266 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.46□□□□□ -1.86
SHOXO15266 AC140479.6-201ENST00000633535 357 ntBASIC3.46□□□□□ -1.86
SHOXO15266 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHOXO15266 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.46□□□□□ -1.86
SHOXO15266 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHOXO15266 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHOXO15266 AC006504.1-201ENST00000562493 3666 ntBASIC3.46□□□□□ -1.86
SHOXO15266 AC079741.1-201ENST00000321498 212 ntBASIC3.45□□□□□ -1.86
SHOXO15266 RNU1-32P-201ENST00000363937 159 ntBASIC3.45□□□□□ -1.86
SHOXO15266 MIR129-1-201ENST00000384972 72 ntBASIC3.45□□□□□ -1.86
SHOXO15266 RNA5SP332-201ENST00000391063 115 ntBASIC3.45□□□□□ -1.86
SHOXO15266 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.45□□□□□ -1.86
SHOXO15266 TOMM22P2-201ENST00000430735 237 ntBASIC3.45□□□□□ -1.86
SHOXO15266 RN7SL132P-201ENST00000478131 296 ntBASIC3.45□□□□□ -1.86
SHOXO15266 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.45□□□□□ -1.86
SHOXO15266 RNU6-406P-201ENST00000516470 107 ntBASIC3.45□□□□□ -1.86
SHOXO15266 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.45□□□□□ -1.86
SHOXO15266 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.45□□□□□ -1.86
SHOXO15266 AC011921.3-201ENST00000605540 361 ntBASIC3.45□□□□□ -1.86
SHOXO15266 SNORA51-201ENST00000606420 132 ntBASIC3.45□□□□□ -1.86
SHOXO15266 AC005828.6-201ENST00000606610 232 ntBASIC3.45□□□□□ -1.86
SHOXO15266 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHOXO15266 AL359854.1-201ENST00000614203 1594 ntBASIC3.45□□□□□ -1.86
SHOXO15266 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHOXO15266 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHOXO15266 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SHOXO15266 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.44□□□□□ -1.86
SHOXO15266 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.44□□□□□ -1.86
SHOXO15266 RNU6-324P-201ENST00000363957 106 ntBASIC3.44□□□□□ -1.86
SHOXO15266 Y_RNA.233-201ENST00000364407 101 ntBASIC3.44□□□□□ -1.86
SHOXO15266 U8.12-201ENST00000384701 133 ntBASIC3.44□□□□□ -1.86
SHOXO15266 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.44□□□□□ -1.86
SHOXO15266 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.44□□□□□ -1.86
SHOXO15266 AC006539.3-201ENST00000454258 129 ntBASIC3.44□□□□□ -1.86
SHOXO15266 RPS29P33-201ENST00000456717 146 ntBASIC3.44□□□□□ -1.86
SHOXO15266 RPL31P41-201ENST00000477967 372 ntBASIC3.44□□□□□ -1.86
SHOXO15266 RPS29P19-201ENST00000479709 171 ntBASIC3.44□□□□□ -1.86
SHOXO15266 AC140059.1-201ENST00000489238 361 ntBASIC3.44□□□□□ -1.86
SHOXO15266 RN7SL810P-201ENST00000493031 276 ntBASIC3.44□□□□□ -1.86
SHOXO15266 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHOXO15266 Y_RNA.703-201ENST00000516846 111 ntBASIC3.44□□□□□ -1.86
SHOXO15266 RNU6-711P-201ENST00000517255 106 ntBASIC3.44□□□□□ -1.86
SHOXO15266 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.44□□□□□ -1.86
SHOXO15266 AC009127.3-201ENST00000570531 403 ntBASIC3.44□□□□□ -1.86
SHOXO15266 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.44□□□□□ -1.86
SHOXO15266 MIR1254-2-201ENST00000579553 63 ntBASIC3.44□□□□□ -1.86
SHOXO15266 AL773545.4-201ENST00000637262 310 ntBASIC3.44□□□□□ -1.86
SHOXO15266 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.44□□□□□ -1.86
SHOXO15266 AL513478.4-201ENST00000641636 310 ntBASIC3.44□□□□□ -1.86
SHOXO15266 MFSD8-236ENST00000641509 4050 ntBASIC3.44□□□□□ -1.86
SHOXO15266 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.44□□□□□ -1.86
SHOXO15266 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.44□□□□□ -1.86
SHOXO15266 AC007256.1-201ENST00000392253 2765 ntBASIC3.44□□□□□ -1.86
SHOXO15266 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.43□□□□□ -1.86
SHOXO15266 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHOXO15266 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.43□□□□□ -1.86
SHOXO15266 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHOXO15266 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHOXO15266 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.43□□□□□ -1.86
SHOXO15266 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.43□□□□□ -1.86
SHOXO15266 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SHOXO15266 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.43□□□□□ -1.86
SHOXO15266 SNORA18.2-201ENST00000383865 132 ntBASIC3.43□□□□□ -1.86
SHOXO15266 RNU6-47P-201ENST00000383866 107 ntBASIC3.43□□□□□ -1.86
SHOXO15266 MIR29B2-201ENST00000385055 81 ntBASIC3.43□□□□□ -1.86
SHOXO15266 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SHOXO15266 RNU6-1199P-201ENST00000411249 104 ntBASIC3.43□□□□□ -1.86
SHOXO15266 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.43□□□□□ -1.86
SHOXO15266 AC097463.2-201ENST00000421074 142 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms