Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AL596028.1-201ENST00000326971 197 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.7□□□□□ -1.98
NPHP1O15259 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.7□□□□□ -1.98
NPHP1O15259 MTCO1P20-201ENST00000425366 358 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 MRPS10P2-201ENST00000431226 381 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP1O15259 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP1O15259 PRELID3BP1-201ENST00000457142 540 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 AC055731.1-201ENST00000474387 401 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 AC107032.1-201ENST00000485945 480 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 Y_RNA.665-201ENST00000516177 98 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 RNU2-19P-201ENST00000517288 84 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.7□□□□□ -1.98
NPHP1O15259 AC104576.1-201ENST00000524225 88 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 TRAV32-201ENST00000553993 340 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP1O15259 AC078795.3-201ENST00000602913 472 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NPHP1O15259 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.7□□□□□ -1.98
NPHP1O15259 MTND4P23-201ENST00000447723 1363 ntBASIC2.7□□□□□ -1.98
NPHP1O15259 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
NPHP1O15259 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.69□□□□□ -1.98
NPHP1O15259 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPHP1O15259 SNORD32B-201ENST00000364460 84 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 Y_RNA.256-201ENST00000364594 104 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 Y_RNA.554-201ENST00000384672 102 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 MIR583-201ENST00000384846 75 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 SNORA12-201ENST00000391162 147 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 AC019129.1-201ENST00000403786 261 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.69□□□□□ -1.98
NPHP1O15259 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.69□□□□□ -1.98
NPHP1O15259 Y_RNA.655-201ENST00000515919 96 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 RNU6-612P-201ENST00000516909 102 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 AC109635.3-201ENST00000529536 185 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.69□□□□□ -1.98
NPHP1O15259 AL078605.1-201ENST00000603529 500 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 AC009831.4-201ENST00000620744 325 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 SNORA43.4-201ENST00000629559 138 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
NPHP1O15259 AC007336.1-201ENST00000576365 3828 ntBASIC2.69□□□□□ -1.98
NPHP1O15259 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NPHP1O15259 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.68□□□□□ -1.98
NPHP1O15259 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.68□□□□□ -1.98
NPHP1O15259 SNORA46.1-201ENST00000391069 153 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 MTCYBP2-201ENST00000407745 171 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 MIR1262-201ENST00000408276 93 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 RNA5SP201-201ENST00000410316 124 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.68□□□□□ -1.98
NPHP1O15259 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.68□□□□□ -1.98
NPHP1O15259 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.68□□□□□ -1.98
NPHP1O15259 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.68□□□□□ -1.98
NPHP1O15259 HMGN2P26-201ENST00000463169 339 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 RPS29P27-201ENST00000463711 170 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 AC008628.2-201ENST00000502605 298 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.68□□□□□ -1.98
NPHP1O15259 SCOCP1-201ENST00000554676 349 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 MIR4529-201ENST00000578110 78 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 AC104458.1-201ENST00000608243 463 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 MIR1248-201ENST00000629190 106 ntBASIC2.68□□□□□ -1.98
NPHP1O15259 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPHP1O15259 RNU4-56P-201ENST00000364700 142 ntBASIC2.67□□□□□ -1.98
NPHP1O15259 Y_RNA.402-201ENST00000383972 102 ntBASIC2.67□□□□□ -1.98
NPHP1O15259 Y_RNA.504-201ENST00000384481 104 ntBASIC2.67□□□□□ -1.98
NPHP1O15259 Y_RNA.516-201ENST00000384541 124 ntBASIC2.67□□□□□ -1.98
NPHP1O15259 SNORA80E-201ENST00000384744 137 ntBASIC2.67□□□□□ -1.98
NPHP1O15259 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
NPHP1O15259 Y_RNA.615-201ENST00000410769 117 ntBASIC2.67□□□□□ -1.98
NPHP1O15259 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.67□□□□□ -1.98
NPHP1O15259 AC092436.3-201ENST00000511788 257 ntBASIC2.67□□□□□ -1.98
NPHP1O15259 ZNF519P2-201ENST00000557032 169 ntBASIC2.67□□□□□ -1.98
NPHP1O15259 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.67□□□□□ -1.98
NPHP1O15259 Y_RNA.9-201ENST00000362354 101 ntBASIC2.66□□□□□ -1.98
NPHP1O15259 MIR518A2-201ENST00000384966 87 ntBASIC2.66□□□□□ -1.98
NPHP1O15259 AL355497.1-201ENST00000406262 551 ntBASIC2.66□□□□□ -1.98
NPHP1O15259 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.66□□□□□ -1.98
NPHP1O15259 C8orf59P1-201ENST00000429930 303 ntBASIC2.66□□□□□ -1.98
NPHP1O15259 GPM6BP3-201ENST00000442797 145 ntBASIC2.66□□□□□ -1.98
NPHP1O15259 AC091435.1-201ENST00000505442 584 ntBASIC2.66□□□□□ -1.98
NPHP1O15259 AC025465.4-201ENST00000513422 638 ntBASIC2.66□□□□□ -1.98
NPHP1O15259 AC007375.1-201ENST00000554513 578 ntBASIC2.66□□□□□ -1.98
NPHP1O15259 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.66□□□□□ -1.98
NPHP1O15259 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.66□□□□□ -1.98
NPHP1O15259 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.66□□□□□ -1.98
NPHP1O15259 AC100830.2-201ENST00000581636 240 ntBASIC2.66□□□□□ -1.98
NPHP1O15259 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.66□□□□□ -1.98
NPHP1O15259 ZNF720P1-201ENST00000562403 1939 ntBASIC2.66□□□□□ -1.98
NPHP1O15259 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
NPHP1O15259 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NPHP1O15259 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
NPHP1O15259 RNU6-227P-201ENST00000362865 103 ntBASIC2.65□□□□□ -1.99
NPHP1O15259 RNY4P14-201ENST00000363656 96 ntBASIC2.65□□□□□ -1.99
NPHP1O15259 RNU6-743P-201ENST00000364151 106 ntBASIC2.65□□□□□ -1.99
NPHP1O15259 RNU6-214P-201ENST00000384130 107 ntBASIC2.65□□□□□ -1.99
NPHP1O15259 SNORA36A-201ENST00000384221 132 ntBASIC2.65□□□□□ -1.99
NPHP1O15259 BTF3L4P2-201ENST00000392798 346 ntBASIC2.65□□□□□ -1.99
NPHP1O15259 MIR450B-201ENST00000401182 78 ntBASIC2.65□□□□□ -1.99
NPHP1O15259 SRIP3-201ENST00000413200 219 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms