Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SNORD57-201ENST00000448188 72 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 MTATP6P9-201ENST00000515039 680 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 RNU6-760P-201ENST00000516078 97 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.11□□□□□ -2.43
CHD1O14646 AC091805.2-201ENST00000603848 235 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 AL356157.2-201ENST00000605122 111 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 AC107905.1-201ENST00000616204 426 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 SNORD114-28-201ENST00000363610 72 ntBASIC-0.12□□□□□ -2.43
CHD1O14646 RNU6-359P-201ENST00000365466 108 ntBASIC-0.12□□□□□ -2.43
CHD1O14646 RNU6-46P-201ENST00000383860 107 ntBASIC-0.12□□□□□ -2.43
CHD1O14646 RNU6-163P-201ENST00000384396 106 ntBASIC-0.12□□□□□ -2.43
CHD1O14646 RNU6-331P-201ENST00000384724 107 ntBASIC-0.12□□□□□ -2.43
CHD1O14646 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.12□□□□□ -2.43
CHD1O14646 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
CHD1O14646 RNU6-947P-201ENST00000516264 106 ntBASIC-0.12□□□□□ -2.43
CHD1O14646 SNORD3E-202ENST00000627253 216 ntBASIC-0.12□□□□□ -2.43
CHD1O14646 MIR103A1-201ENST00000362165 78 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 RNU6-833P-201ENST00000363486 107 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 MT-TQ-201ENST00000387372 72 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 AF228730.1-201ENST00000397972 663 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHD1O14646 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHD1O14646 AC010153.1-201ENST00000432862 727 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 MTND5P2-201ENST00000442927 1142 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHD1O14646 AC026410.2-201ENST00000460281 156 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHD1O14646 RNA5SP227-201ENST00000516184 113 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHD1O14646 AF038458.1-201ENST00000588406 262 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.13□□□□□ -2.43
CHD1O14646 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 MIR3529-201ENST00000637713 78 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 RNY4P24-201ENST00000362735 96 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
CHD1O14646 RNU6-657P-201ENST00000383904 107 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 AC244098.3-201ENST00000424803 96 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.13□□□□□ -2.43
CHD1O14646 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHD1O14646 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.13□□□□□ -2.43
CHD1O14646 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 MTCO3P28-201ENST00000513351 515 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 RN7SKP12-201ENST00000516275 143 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHD1O14646 MIR4709-201ENST00000577272 72 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 AC092354.1-201ENST00000606057 376 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.13□□□□□ -2.43
CHD1O14646 SNORA40C-201ENST00000391285 128 ntBASIC-0.14□□□□□ -2.43
CHD1O14646 AC011233.1-201ENST00000422812 283 ntBASIC-0.14□□□□□ -2.43
CHD1O14646 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.14□□□□□ -2.43
CHD1O14646 AL035398.1-201ENST00000430869 322 ntBASIC-0.14□□□□□ -2.43
CHD1O14646 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.14□□□□□ -2.43
CHD1O14646 MTCO3P45-201ENST00000443036 613 ntBASIC-0.14□□□□□ -2.43
CHD1O14646 MED28P2-201ENST00000475771 317 ntBASIC-0.14□□□□□ -2.43
CHD1O14646 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.14□□□□□ -2.43
CHD1O14646 AL451064.1-201ENST00000607718 471 ntBASIC-0.14□□□□□ -2.43
CHD1O14646 AC093788.1-201ENST00000609356 927 ntBASIC-0.14□□□□□ -2.43
CHD1O14646 SNORD44.1-201ENST00000363202 61 ntBASIC-0.15□□□□□ -2.43
CHD1O14646 RNU6-188P-201ENST00000364207 107 ntBASIC-0.15□□□□□ -2.43
CHD1O14646 SNORD114-9-201ENST00000364370 72 ntBASIC-0.15□□□□□ -2.43
CHD1O14646 AL359704.1-201ENST00000411586 781 ntBASIC-0.15□□□□□ -2.43
CHD1O14646 SNX3P1X-201ENST00000414887 175 ntBASIC-0.15□□□□□ -2.43
CHD1O14646 RAC1P6-201ENST00000423911 575 ntBASIC-0.15□□□□□ -2.43
CHD1O14646 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.15□□□□□ -2.43
CHD1O14646 MTND2P33-201ENST00000506452 1031 ntBASIC-0.15□□□□□ -2.43
CHD1O14646 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.15□□□□□ -2.43
CHD1O14646 AL132657.2-201ENST00000564417 358 ntBASIC-0.15□□□□□ -2.43
CHD1O14646 MIR4637-201ENST00000582405 84 ntBASIC-0.15□□□□□ -2.43
CHD1O14646 AL163051.2-201ENST00000618976 735 ntBASIC-0.15□□□□□ -2.43
CHD1O14646 AL159153.1-201ENST00000619688 317 ntBASIC-0.15□□□□□ -2.43
CHD1O14646 MIRLET7D-201ENST00000362263 87 ntBASIC-0.16□□□□□ -2.43
CHD1O14646 RNU4-9P-201ENST00000364951 139 ntBASIC-0.16□□□□□ -2.43
CHD1O14646 SNORA36.2-201ENST00000384004 127 ntBASIC-0.16□□□□□ -2.43
CHD1O14646 RNU6-843P-201ENST00000384454 104 ntBASIC-0.16□□□□□ -2.43
CHD1O14646 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.43
CHD1O14646 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.16□□□□□ -2.43
CHD1O14646 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.16□□□□□ -2.43
CHD1O14646 RNU6-885P-201ENST00000516607 104 ntBASIC-0.16□□□□□ -2.43
CHD1O14646 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.16□□□□□ -2.43
CHD1O14646 AC063943.3-201ENST00000615562 356 ntBASIC-0.16□□□□□ -2.43
CHD1O14646 MIR1264-201ENST00000616374 69 ntBASIC-0.16□□□□□ -2.43
CHD1O14646 AC073349.3-201ENST00000617616 186 ntBASIC-0.16□□□□□ -2.43
CHD1O14646 RNU6-654P-201ENST00000364373 107 ntBASIC-0.16□□□□□ -2.44
CHD1O14646 RNU6-512P-201ENST00000364438 103 ntBASIC-0.16□□□□□ -2.44
CHD1O14646 RNU6-487P-201ENST00000365430 104 ntBASIC-0.16□□□□□ -2.44
CHD1O14646 RNA5SP219-201ENST00000390940 113 ntBASIC-0.16□□□□□ -2.44
CHD1O14646 RNA5SP504-201ENST00000410676 117 ntBASIC-0.16□□□□□ -2.44
CHD1O14646 MTCO3P41-201ENST00000414801 328 ntBASIC-0.16□□□□□ -2.44
CHD1O14646 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.16□□□□□ -2.44
CHD1O14646 DAP3P1-201ENST00000441522 278 ntBASIC-0.16□□□□□ -2.44
CHD1O14646 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.16□□□□□ -2.44
CHD1O14646 uc_338.34-201ENST00000617467 174 ntBASIC-0.16□□□□□ -2.44
CHD1O14646 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
CHD1O14646 RNA5SP264-201ENST00000363115 107 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms