Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 Y_RNA.324-201ENST00000365165 102 ntBASIC2.03□□□□□ -2.08
CUX2O14529 SNORA25B-201ENST00000365507 128 ntBASIC2.03□□□□□ -2.08
CUX2O14529 RNU4-48P-201ENST00000365559 182 ntBASIC2.03□□□□□ -2.08
CUX2O14529 RNU6-1029P-201ENST00000384109 107 ntBASIC2.03□□□□□ -2.08
CUX2O14529 RNU2-23P-201ENST00000410545 195 ntBASIC2.03□□□□□ -2.08
CUX2O14529 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.03□□□□□ -2.08
CUX2O14529 RNU6-377P-201ENST00000515965 102 ntBASIC2.03□□□□□ -2.08
CUX2O14529 RNA5SP503-201ENST00000517047 117 ntBASIC2.03□□□□□ -2.08
CUX2O14529 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.03□□□□□ -2.08
CUX2O14529 OSBPL9P5-201ENST00000542581 171 ntBASIC2.03□□□□□ -2.08
CUX2O14529 AC026271.5-201ENST00000577873 130 ntBASIC2.03□□□□□ -2.08
CUX2O14529 AP003400.5-201ENST00000624827 617 ntBASIC2.03□□□□□ -2.08
CUX2O14529 AC090517.3-201ENST00000625170 141 ntBASIC2.03□□□□□ -2.08
CUX2O14529 MTND5P9-201ENST00000503854 1755 ntBASIC2.03□□□□□ -2.08
CUX2O14529 RNU6-655P-201ENST00000362858 107 ntBASIC2.02□□□□□ -2.09
CUX2O14529 Y_RNA.367-201ENST00000365544 101 ntBASIC2.02□□□□□ -2.09
CUX2O14529 MIR544A-201ENST00000384855 91 ntBASIC2.02□□□□□ -2.09
CUX2O14529 RNU6-550P-201ENST00000391057 101 ntBASIC2.02□□□□□ -2.09
CUX2O14529 AL355497.1-201ENST00000406262 551 ntBASIC2.02□□□□□ -2.09
CUX2O14529 RNA5SP127-201ENST00000411051 133 ntBASIC2.02□□□□□ -2.09
CUX2O14529 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.02□□□□□ -2.09
CUX2O14529 AC092447.3-201ENST00000426027 686 ntBASIC2.02□□□□□ -2.09
CUX2O14529 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.02□□□□□ -2.09
CUX2O14529 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.02□□□□□ -2.09
CUX2O14529 MTND2P4-201ENST00000445034 1004 ntBASIC2.02□□□□□ -2.09
CUX2O14529 AC105417.1-201ENST00000514691 285 ntBASIC2.02□□□□□ -2.09
CUX2O14529 SNORA4.4-201ENST00000515921 135 ntBASIC2.02□□□□□ -2.09
CUX2O14529 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.02□□□□□ -2.09
CUX2O14529 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.02□□□□□ -2.09
CUX2O14529 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.02□□□□□ -2.09
CUX2O14529 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.02□□□□□ -2.09
CUX2O14529 AP001893.2-201ENST00000526949 202 ntBASIC2.02□□□□□ -2.09
CUX2O14529 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CUX2O14529 RNU6-212P-201ENST00000362642 104 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU1-72P-201ENST00000362976 153 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU6-1245P-201ENST00000411130 106 ntBASIC2.01□□□□□ -2.09
CUX2O14529 OR9R1P-201ENST00000412200 877 ntBASIC2.01□□□□□ -2.09
CUX2O14529 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.01□□□□□ -2.09
CUX2O14529 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.01□□□□□ -2.09
CUX2O14529 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.01□□□□□ -2.09
CUX2O14529 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.01□□□□□ -2.09
CUX2O14529 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.01□□□□□ -2.09
CUX2O14529 AC132479.1-201ENST00000449160 144 ntBASIC2.01□□□□□ -2.09
CUX2O14529 AC079448.1-201ENST00000449377 373 ntBASIC2.01□□□□□ -2.09
CUX2O14529 AC107032.1-201ENST00000485945 480 ntBASIC2.01□□□□□ -2.09
CUX2O14529 AC107953.1-201ENST00000522216 297 ntBASIC2.01□□□□□ -2.09
CUX2O14529 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.01□□□□□ -2.09
CUX2O14529 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.01□□□□□ -2.09
CUX2O14529 MIR4714-201ENST00000580728 77 ntBASIC2.01□□□□□ -2.09
CUX2O14529 MTND4P14-201ENST00000435799 1354 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU6-1210P-201ENST00000363775 107 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU6-282P-201ENST00000365357 103 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU6-25P-201ENST00000383873 107 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU6-48P-201ENST00000384161 107 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU6-16P-201ENST00000384385 107 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU6-393P-201ENST00000384475 107 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU6-15P-201ENST00000384534 107 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU6-29P-201ENST00000384637 107 ntBASIC2.01□□□□□ -2.09
CUX2O14529 AF228730.1-201ENST00000397972 663 ntBASIC2.01□□□□□ -2.09
CUX2O14529 CBX3P9-201ENST00000402326 552 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU2-3P-201ENST00000410144 191 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RNU6-248P-201ENST00000410720 107 ntBASIC2.01□□□□□ -2.09
CUX2O14529 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.01□□□□□ -2.09
CUX2O14529 AC133104.1-201ENST00000429100 218 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RPL39P29-201ENST00000447779 157 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RPS27AP8-201ENST00000452665 445 ntBASIC2.01□□□□□ -2.09
CUX2O14529 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.01□□□□□ -2.09
CUX2O14529 MTCO2P6-201ENST00000463134 685 ntBASIC2.01□□□□□ -2.09
CUX2O14529 RPL30P1-201ENST00000488676 339 ntBASIC2.01□□□□□ -2.09
CUX2O14529 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.01□□□□□ -2.09
CUX2O14529 MTCO3P9-201ENST00000506989 781 ntBASIC2.01□□□□□ -2.09
CUX2O14529 MTCYBP40-201ENST00000509390 1135 ntBASIC2.01□□□□□ -2.09
CUX2O14529 SNORA48.11-201ENST00000517015 89 ntBASIC2.01□□□□□ -2.09
CUX2O14529 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.01□□□□□ -2.09
CUX2O14529 AL391840.1-201ENST00000571144 367 ntBASIC2.01□□□□□ -2.09
CUX2O14529 MIR3913-1-201ENST00000577744 102 ntBASIC2.01□□□□□ -2.09
CUX2O14529 MIR4529-201ENST00000578110 78 ntBASIC2.01□□□□□ -2.09
CUX2O14529 AC078899.2-201ENST00000595282 212 ntBASIC2.01□□□□□ -2.09
CUX2O14529 AC073539.2-201ENST00000597113 165 ntBASIC2.01□□□□□ -2.09
CUX2O14529 AC087752.4-201ENST00000605911 462 ntBASIC2.01□□□□□ -2.09
CUX2O14529 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CUX2O14529 SNORD116-8-201ENST00000384365 95 ntBASIC2□□□□□ -2.09
CUX2O14529 SNORA40.19-201ENST00000390846 128 ntBASIC2□□□□□ -2.09
CUX2O14529 AL591034.2-201ENST00000402839 359 ntBASIC2□□□□□ -2.09
CUX2O14529 RN7SKP142-201ENST00000411236 328 ntBASIC2□□□□□ -2.09
CUX2O14529 MTND1P26-201ENST00000440488 538 ntBASIC2□□□□□ -2.09
CUX2O14529 PSPHP1-201ENST00000450062 261 ntBASIC2□□□□□ -2.09
CUX2O14529 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2□□□□□ -2.09
CUX2O14529 AL162395.1-201ENST00000457882 422 ntBASIC2□□□□□ -2.09
CUX2O14529 RNA5SP233-201ENST00000459153 113 ntBASIC2□□□□□ -2.09
CUX2O14529 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2□□□□□ -2.09
CUX2O14529 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
CUX2O14529 AC079140.5-201ENST00000507882 310 ntBASIC2□□□□□ -2.09
CUX2O14529 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2□□□□□ -2.09
CUX2O14529 AC010493.1-201ENST00000513479 292 ntBASIC2□□□□□ -2.09
CUX2O14529 SNORA31.25-201ENST00000517242 134 ntBASIC2□□□□□ -2.09
CUX2O14529 MIR4295-201ENST00000585286 85 ntBASIC2□□□□□ -2.09
CUX2O14529 AC119751.7-201ENST00000600494 245 ntBASIC2□□□□□ -2.09
CUX2O14529 AC008536.2-201ENST00000607284 349 ntBASIC2□□□□□ -2.09
CUX2O14529 AC022202.1-201ENST00000613515 211 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms