Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR93-201ENST00000385024 80 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 MIR1287-201ENST00000408492 90 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 MICF-203ENST00000432679 129 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 AP000705.1-201ENST00000454567 350 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 RPS29P26-201ENST00000477483 171 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 RPL31P41-201ENST00000477967 372 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 AC090525.1-201ENST00000479116 478 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 RPL36AP48-201ENST00000485521 314 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 RPL22P13-201ENST00000493291 347 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 RAC1P5-201ENST00000512182 576 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 RNA5SP458-201ENST00000516188 119 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 RNU6-1046P-201ENST00000516538 107 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 SNORA31.16-201ENST00000516773 139 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 HSBP1P1-201ENST00000555205 166 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 SNORD53-201ENST00000579969 78 ntBASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC85CA6NKD9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 AC092435.3-201ENST00000565538 3654 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 Y_RNA.106-201ENST00000363189 100 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 SNORD14.1-201ENST00000365609 90 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 RHOT1P2-201ENST00000366423 333 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 Y_RNA.459-201ENST00000384251 102 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 RNU6-1105P-201ENST00000384774 107 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 MIR32-201ENST00000384965 70 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 RNA5SP213-201ENST00000391031 106 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 MTND3P2-201ENST00000438452 342 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 AL121594.1-201ENST00000475906 575 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 MRPS36P2-201ENST00000512569 299 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 AC027288.2-201ENST00000553028 243 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 CYP4A27P-201ENST00000567218 190 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 MIR5047-201ENST00000579212 100 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 AL034555.1-201ENST00000604816 211 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 AC110741.2-201ENST00000605278 268 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 HMGB1P50-201ENST00000605814 607 ntBASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC85CA6NKD9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CCDC85CA6NKD9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC85CA6NKD9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.65□□□□□ -1.82
CCDC85CA6NKD9 AC010329.5-201ENST00000623497 2174 ntBASIC3.65□□□□□ -1.82
CCDC85CA6NKD9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC85CA6NKD9 MTND5P16-201ENST00000460269 1703 ntBASIC3.65□□□□□ -1.82
CCDC85CA6NKD9 RNU6-212P-201ENST00000362642 104 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.338-201ENST00000365320 114 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 SNORA63.7-201ENST00000365579 123 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.424-201ENST00000384063 103 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 MIR513A2-201ENST00000385249 127 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 RNU6-101P-201ENST00000410323 104 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 AC096644.2-201ENST00000429278 159 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 AC112771.1-201ENST00000463581 102 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 TOMM22P6-201ENST00000465035 409 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 TRBV12-2-201ENST00000489763 344 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 SEM1P1-201ENST00000506694 209 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 RNU6-1198P-201ENST00000516904 67 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 AC040926.1-201ENST00000530195 238 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 AL442163.3-201ENST00000554110 156 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 AL355297.3-201ENST00000604082 446 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 AL021879.1-201ENST00000611756 288 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 MIR4727-201ENST00000622232 55 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 AL078596.1-201ENST00000624856 447 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 AC006504.1-201ENST00000562493 3666 ntBASIC3.65□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.153-201ENST00000363615 91 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 SNORD74.4-201ENST00000364129 80 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 U3.13-201ENST00000364804 214 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.389-201ENST00000383924 113 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 RPL21P75-201ENST00000396599 483 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 RPL21P28-201ENST00000401418 483 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 CBX3P9-201ENST00000402326 552 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 HLFP1-201ENST00000402375 499 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 MIR1252-201ENST00000408861 65 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 RNA5SP201-201ENST00000410316 124 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 AC097463.2-201ENST00000421074 142 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 AL590556.1-201ENST00000423231 483 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 ARF4P2-201ENST00000430209 526 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 AC011742.1-201ENST00000431448 434 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms