Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 MIR5692C1-201ENST00000585309 91 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AC096772.1-201ENST00000609146 564 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AC064836.2-201ENST00000609491 462 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AL627230.6-201ENST00000611129 280 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 RMST_3.1-201ENST00000611651 109 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AC103705.1-201ENST00000619013 241 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AC090517.3-201ENST00000625170 141 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 FER-210ENST00000628534 558 ntTSL 5 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AC068137.3-201ENST00000639191 341 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 AC073869.6-201ENST00000640656 341 ntBASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.67□□□□□ -2.14
NKX2-6A6NCS4 RNU6-1010P-201ENST00000362757 107 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 Y_RNA.231-201ENST00000364358 102 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 RNU6-522P-201ENST00000364497 107 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 Y_RNA.450-201ENST00000384198 113 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 MIR181A1-201ENST00000385026 110 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 MIR514A2-201ENST00000385131 88 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 MIR514A3-201ENST00000385132 88 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 SUMO2P12-201ENST00000405924 140 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 MRPS10P2-201ENST00000431226 381 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AL353752.1-201ENST00000454946 260 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC006026.2-201ENST00000457376 180 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 RNU6-1208P-201ENST00000459588 107 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC080013.2-201ENST00000460866 323 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC068781.1-201ENST00000488231 618 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 RN7SL274P-201ENST00000492268 272 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC008526.1-201ENST00000509149 338 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AP005597.4-201ENST00000526762 229 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 MIR4781-201ENST00000585250 76 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC098679.4-201ENST00000624241 654 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 AC027514.1-201ENST00000588561 1603 ntBASIC1.66□□□□□ -2.14
NKX2-6A6NCS4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
NKX2-6A6NCS4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
NKX2-6A6NCS4 MIR378A-201ENST00000362177 66 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 RNU1-23P-201ENST00000363361 144 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 RNY3P3-201ENST00000363816 102 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.402-201ENST00000383972 102 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 RNU2-23P-201ENST00000410545 195 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 ERLEC1P1-201ENST00000433806 578 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 PMCHL2-203ENST00000457791 237 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AC018437.1-201ENST00000492214 406 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.654-201ENST00000497848 106 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AF213884.2-201ENST00000510417 903 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AC091874.1-201ENST00000511402 339 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 MRPS17P9-201ENST00000511924 393 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 RNU6-1069P-201ENST00000516612 133 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 RNU6-1332P-201ENST00000516666 104 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 PSMA3P-201ENST00000555485 635 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AL133241.1-201ENST00000556832 487 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AC007229.1-201ENST00000590455 412 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 BNIP3P25-201ENST00000596023 559 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AL355297.2-201ENST00000604792 129 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AC104458.1-201ENST00000608243 463 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 DISC2.1-201ENST00000612827 205 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AC022202.1-201ENST00000613515 211 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 AC063943.3-201ENST00000615562 356 ntBASIC1.65□□□□□ -2.15
NKX2-6A6NCS4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 HAUS6P2-201ENST00000433254 2404 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.9-201ENST00000362354 101 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.89-201ENST00000363031 102 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 RNY4P14-201ENST00000363656 96 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.256-201ENST00000364594 104 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.295-201ENST00000364918 102 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 RNU6-487P-201ENST00000365430 104 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 RNA5SP390-201ENST00000410191 113 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 MTND1P4-201ENST00000435196 415 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms