Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPL18P10-201ENST00000425606 538 ntBASIC3.45□□□□□ -1.86
SHISA3A0PJX4 AL365496.1-201ENST00000426885 215 ntBASIC3.45□□□□□ -1.86
SHISA3A0PJX4 RPL23AP1-201ENST00000428990 471 ntBASIC3.45□□□□□ -1.86
SHISA3A0PJX4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.45□□□□□ -1.86
SHISA3A0PJX4 TRBV12-2-201ENST00000489763 344 ntBASIC3.45□□□□□ -1.86
SHISA3A0PJX4 AC145146.1-201ENST00000496370 254 ntBASIC3.45□□□□□ -1.86
SHISA3A0PJX4 RNA5SP309-201ENST00000516670 106 ntBASIC3.45□□□□□ -1.86
SHISA3A0PJX4 MIR4697-201ENST00000582977 78 ntBASIC3.45□□□□□ -1.86
SHISA3A0PJX4 MIR5006-201ENST00000583027 110 ntBASIC3.45□□□□□ -1.86
SHISA3A0PJX4 RPL17P51-201ENST00000605218 238 ntBASIC3.45□□□□□ -1.86
SHISA3A0PJX4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.45□□□□□ -1.86
SHISA3A0PJX4 AC023043.4-201ENST00000612081 449 ntBASIC3.45□□□□□ -1.86
SHISA3A0PJX4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.45□□□□□ -1.86
SHISA3A0PJX4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHISA3A0PJX4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.45□□□□□ -1.86
SHISA3A0PJX4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
SHISA3A0PJX4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 AC007496.3-201ENST00000624987 3443 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 RNA5SP399-201ENST00000364003 117 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 AL031003.1-201ENST00000404229 172 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 RNA5SP504-201ENST00000410676 117 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 SNORA71B-202ENST00000439232 272 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 RPS20P10-201ENST00000451209 253 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 RN7SKP164-201ENST00000516138 266 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 AC025281.1-201ENST00000567026 265 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 MIR4277-201ENST00000578298 84 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 AL356218.2-201ENST00000605264 187 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 uc_338.14-201ENST00000613162 166 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 U7.8-201ENST00000619968 63 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.44□□□□□ -1.86
SHISA3A0PJX4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHISA3A0PJX4 AC069528.2-201ENST00000624849 1991 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHISA3A0PJX4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.43□□□□□ -1.86
SHISA3A0PJX4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHISA3A0PJX4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SHISA3A0PJX4 U3.8-201ENST00000363675 217 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 RNU1-132P-201ENST00000364300 164 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 Y_RNA.243-201ENST00000364481 109 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 Y_RNA.287-201ENST00000364853 94 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 RNU6-275P-201ENST00000364910 107 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 Y_RNA.488-201ENST00000384403 102 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 RNA5SP38-201ENST00000410750 119 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.43□□□□□ -1.86
SHISA3A0PJX4 AC011998.1-201ENST00000433403 117 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 Z75741.1-201ENST00000446793 314 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 RN7SL385P-201ENST00000468873 276 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 AC099522.1-202ENST00000514718 367 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 RN7SKP83-201ENST00000516512 178 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 DEFB131C-201ENST00000528817 165 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.43□□□□□ -1.86
SHISA3A0PJX4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.43□□□□□ -1.86
SHISA3A0PJX4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.43□□□□□ -1.86
SHISA3A0PJX4 AC013791.1-201ENST00000616619 62 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 AC008873.1-201ENST00000625051 138 ntBASIC3.43□□□□□ -1.86
SHISA3A0PJX4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.43□□□□□ -1.86
SHISA3A0PJX4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHISA3A0PJX4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHISA3A0PJX4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 RNU6-103P-201ENST00000363686 107 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 RNU6-801P-201ENST00000364087 105 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 SNORD87-201ENST00000364849 89 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 SNORA18.2-201ENST00000383865 132 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 Y_RNA.497-201ENST00000384447 98 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 Y_RNA.568-201ENST00000384742 113 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 RNU6-381P-201ENST00000391259 108 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 EBAG9P1-201ENST00000418955 543 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 AL162725.1-201ENST00000435405 301 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 SEPT7P4-201ENST00000437076 306 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 HMGN2P20-201ENST00000437531 273 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 RPS29P31-201ENST00000446147 164 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 RN7SL810P-201ENST00000493031 276 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 RNU2-44P-201ENST00000516795 194 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 AC006133.1-201ENST00000617106 264 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 MIR6810-201ENST00000622701 70 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms