Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 HMGN1P13-201ENST00000505795 138 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AK3P2-201ENST00000507976 429 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 LRRC34P2-201ENST00000514850 553 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU2-69P-201ENST00000516061 100 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 SNORA18.6-201ENST00000516792 115 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AP003034.1-201ENST00000534621 422 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 HMGB1P33-201ENST00000563485 527 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MIR4421-201ENST00000578133 69 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MIR4422-201ENST00000581938 83 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 VN1R107P-201ENST00000601784 209 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC078795.3-201ENST00000602913 472 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC245014.2-201ENST00000603689 287 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC246785.4-201ENST00000605374 287 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC002044.1-201ENST00000606707 158 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AL512598.1-201ENST00000610158 273 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 uc_338.11-201ENST00000619132 160 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC007494.3-201ENST00000624660 743 ntBASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
IGHV3-43A0A0B4J1X8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 Y_RNA.140-201ENST00000363474 103 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 U3.9-201ENST00000363823 204 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU6-827P-201ENST00000365553 106 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 SNORA16.2-201ENST00000390991 127 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RPS29P13-201ENST00000402041 169 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU2-41P-201ENST00000410991 178 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AL121601.2-201ENST00000438019 707 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MTND1P18-201ENST00000448191 573 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RPS27AP8-201ENST00000452665 445 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RPL31P3-201ENST00000458430 332 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RNU7-95P-201ENST00000459222 64 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC016632.1-201ENST00000503994 196 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MTCO3P28-201ENST00000513351 515 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RN7SKP219-201ENST00000516825 296 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 SNORA25.17-201ENST00000517184 124 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC103996.1-201ENST00000555468 102 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 RSL24D1P11-201ENST00000591045 491 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 VN1R80P-201ENST00000597126 338 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC064872.1-201ENST00000604823 1072 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 AC068205.3-201ENST00000636385 468 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 MTND4P14-201ENST00000435799 1354 ntBASIC1.03□□□□□ -2.24
IGHV3-43A0A0B4J1X8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.03□□□□□ -2.25
IGHV3-43A0A0B4J1X8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-552P-201ENST00000362869 119 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-266P-201ENST00000364225 107 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-456P-201ENST00000384493 107 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-1127P-201ENST00000384580 107 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-296P-201ENST00000384608 107 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SNORA12.2-201ENST00000391040 156 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SNORA26.3-201ENST00000391119 136 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SNORA40.6-201ENST00000391153 128 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 UBE2V1P8-201ENST00000437166 265 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL133217.1-201ENST00000450980 425 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC009474.2-201ENST00000451383 136 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC022364.2-201ENST00000457963 554 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU7-14P-201ENST00000459331 62 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 TOMM22P6-201ENST00000465035 409 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU5F-4P-201ENST00000516581 114 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC109446.2-201ENST00000567872 497 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 MIR3915-201ENST00000578518 97 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL356157.2-201ENST00000605122 111 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 PCGEM1.1-201ENST00000613431 131 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC083806.3-201ENST00000614016 455 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 MIR6715A-201ENST00000615929 79 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SNORA7.1-201ENST00000363750 139 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-271P-201ENST00000363858 105 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-282P-201ENST00000365357 103 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 Y_RNA.504-201ENST00000384481 104 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-297P-201ENST00000384636 107 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU1-78P-201ENST00000391248 165 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-955P-201ENST00000410497 104 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 BX295541.1-201ENST00000417774 250 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RPL23AP95-201ENST00000426806 265 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC133104.1-201ENST00000429100 218 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL133396.1-201ENST00000432048 687 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms