Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 KRT8P32-201ENST00000512863 1461 ntBASIC28.22■■■□□ 2.11
SHANK2Q9UPX8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
SHANK2Q9UPX8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SHANK2Q9UPX8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SHANK2Q9UPX8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SHANK2Q9UPX8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 AC008556.1-201ENST00000610908 2040 ntBASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 MIR662-201ENST00000384847 95 ntBASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 AL121672.3-201ENST00000608644 468 ntBASIC28.21■■■□□ 2.11
SHANK2Q9UPX8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
SHANK2Q9UPX8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SHANK2Q9UPX8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 AC016734.2-201ENST00000624325 1377 ntBASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 TSSC2-201ENST00000450217 709 ntBASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 AC011498.5-201ENST00000592027 486 ntBASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 IRX1P1-201ENST00000438849 1838 ntBASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
SHANK2Q9UPX8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 RN7SL510P-201ENST00000581311 263 ntBASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SHANK2Q9UPX8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 KRT18P23-201ENST00000435622 1283 ntBASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SHANK2Q9UPX8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 UBQLN4P1-201ENST00000461599 1801 ntBASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 CHCHD2P8-201ENST00000429873 447 ntBASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 KRT8P26-201ENST00000534154 1276 ntBASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 AC141586.3-201ENST00000562166 1838 ntBASIC28.17■■■□□ 2.1
SHANK2Q9UPX8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms