Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL355385.1-201ENST00000606123 409 ntBASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 AL390719.2-201ENST00000606993 987 ntBASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.95■■□□□ 1.26
ZC3H4Q9UPT8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 MED22-202ENST00000371999 987 ntTSL 3 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 AC005104.2-201ENST00000427818 678 ntBASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 MOK-208ENST00000519058 917 ntTSL 2 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 AC112497.1-201ENST00000624824 639 ntBASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 FEM1AP1-201ENST00000431297 1995 ntBASIC22.94■■□□□ 1.26
ZC3H4Q9UPT8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 FAM197Y8-203ENST00000450145 560 ntBASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 IGHV3-41-201ENST00000613121 348 ntBASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3H4Q9UPT8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
ZC3H4Q9UPT8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3H4Q9UPT8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3H4Q9UPT8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3H4Q9UPT8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.92■■□□□ 1.26
ZC3H4Q9UPT8 AF186996.4-201ENST00000467186 377 ntBASIC22.92■■□□□ 1.26
ZC3H4Q9UPT8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
ZC3H4Q9UPT8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3H4Q9UPT8 AC022898.2-201ENST00000616822 1312 ntBASIC22.92■■□□□ 1.26
ZC3H4Q9UPT8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.92■■□□□ 1.26
ZC3H4Q9UPT8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3H4Q9UPT8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 AL023284.2-201ENST00000405850 579 ntBASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms