Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 AP000997.3-201ENST00000623333 2250 ntBASIC11.29□□□□□ -0.6
LIMD2Q9BT23 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 GUSBP6-202ENST00000438529 1198 ntBASIC11.29□□□□□ -0.6
LIMD2Q9BT23 YBX1P10-201ENST00000444752 975 ntBASIC11.29□□□□□ -0.6
LIMD2Q9BT23 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 RPS2P52-201ENST00000469610 820 ntBASIC11.29□□□□□ -0.6
LIMD2Q9BT23 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 AC006557.6-201ENST00000623071 864 ntBASIC11.29□□□□□ -0.6
LIMD2Q9BT23 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LIMD2Q9BT23 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 MYC-209ENST00000641252 345 ntBASIC11.28□□□□□ -0.6
LIMD2Q9BT23 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 TFP1-202ENST00000475455 1573 ntBASIC11.28□□□□□ -0.6
LIMD2Q9BT23 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LIMD2Q9BT23 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC11.27□□□□□ -0.6
LIMD2Q9BT23 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LIMD2Q9BT23 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LIMD2Q9BT23 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC11.27□□□□□ -0.6
LIMD2Q9BT23 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LIMD2Q9BT23 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LIMD2Q9BT23 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LIMD2Q9BT23 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 HES2-206ENST00000489730 730 ntTSL 2 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 AC090192.1-201ENST00000517740 490 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms