Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.6■□□□□ 0.57
CFAP54Q96N23 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.6■□□□□ 0.57
CFAP54Q96N23 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP54Q96N23 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP54Q96N23 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.6■□□□□ 0.57
CFAP54Q96N23 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.6■□□□□ 0.57
CFAP54Q96N23 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP54Q96N23 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CFAP54Q96N23 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CFAP54Q96N23 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 AP006288.1-201ENST00000446065 395 ntBASIC18.59■□□□□ 0.57
CFAP54Q96N23 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 MIR4674-201ENST00000582457 87 ntBASIC18.59■□□□□ 0.57
CFAP54Q96N23 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 ZNF259P1-201ENST00000407656 1365 ntBASIC18.59■□□□□ 0.57
CFAP54Q96N23 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 AL591424.1-201ENST00000442569 1213 ntBASIC18.59■□□□□ 0.57
CFAP54Q96N23 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CFAP54Q96N23 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CFAP54Q96N23 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.58■□□□□ 0.57
CFAP54Q96N23 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
CFAP54Q96N23 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CFAP54Q96N23 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.58■□□□□ 0.57
CFAP54Q96N23 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CFAP54Q96N23 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CFAP54Q96N23 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.58■□□□□ 0.57
CFAP54Q96N23 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.58■□□□□ 0.57
CFAP54Q96N23 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.58■□□□□ 0.57
CFAP54Q96N23 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CFAP54Q96N23 MIR1199-201ENST00000621445 119 ntBASIC18.58■□□□□ 0.57
CFAP54Q96N23 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.58■□□□□ 0.57
CFAP54Q96N23 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.58■□□□□ 0.56
CFAP54Q96N23 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.58■□□□□ 0.56
CFAP54Q96N23 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.58■□□□□ 0.56
CFAP54Q96N23 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.58■□□□□ 0.56
CFAP54Q96N23 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP54Q96N23 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CFAP54Q96N23 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.58■□□□□ 0.56
CFAP54Q96N23 IGHV3-47-201ENST00000425060 335 ntBASIC18.58■□□□□ 0.56
CFAP54Q96N23 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.58■□□□□ 0.56
CFAP54Q96N23 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CFAP54Q96N23 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CFAP54Q96N23 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 AL691432.2-201ENST00000607222 2038 ntBASIC18.57■□□□□ 0.56
CFAP54Q96N23 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 DNAJB3-201ENST00000446806 729 ntBASIC18.57■□□□□ 0.56
CFAP54Q96N23 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 AC012645.4-201ENST00000610691 1061 ntBASIC18.57■□□□□ 0.56
CFAP54Q96N23 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.57■□□□□ 0.56
CFAP54Q96N23 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CFAP54Q96N23 AC036111.1-201ENST00000533973 1582 ntBASIC18.57■□□□□ 0.56
CFAP54Q96N23 KRT8P17-201ENST00000453110 1448 ntBASIC18.56■□□□□ 0.56
CFAP54Q96N23 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.56■□□□□ 0.56
CFAP54Q96N23 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CFAP54Q96N23 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
CFAP54Q96N23 AC145285.3-201ENST00000564603 959 ntBASIC18.56■□□□□ 0.56
CFAP54Q96N23 AL596442.2-201ENST00000610240 980 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms