Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLX4Q8IY92 HOXB1-202ENST00000577092 1414 ntBASIC23.13■■□□□ 1.29
SLX4Q8IY92 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.13■■□□□ 1.29
SLX4Q8IY92 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLX4Q8IY92 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLX4Q8IY92 IGHV3-47-201ENST00000425060 335 ntBASIC23.12■■□□□ 1.29
SLX4Q8IY92 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 AC139530.3-201ENST00000620344 690 ntBASIC23.12■■□□□ 1.29
SLX4Q8IY92 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLX4Q8IY92 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLX4Q8IY92 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLX4Q8IY92 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLX4Q8IY92 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 SAPCD2P3-201ENST00000455031 850 ntBASIC23.12■■□□□ 1.29
SLX4Q8IY92 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SLX4Q8IY92 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLX4Q8IY92 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLX4Q8IY92 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLX4Q8IY92 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLX4Q8IY92 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLX4Q8IY92 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLX4Q8IY92 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
SLX4Q8IY92 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SLX4Q8IY92 MIR574-201ENST00000385209 96 ntBASIC23.11■■□□□ 1.29
SLX4Q8IY92 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SLX4Q8IY92 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.11■■□□□ 1.29
SLX4Q8IY92 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
SLX4Q8IY92 AF238378.1-201ENST00000526806 358 ntBASIC23.11■■□□□ 1.29
SLX4Q8IY92 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLX4Q8IY92 AP005901.3-202ENST00000581653 237 ntBASIC23.11■■□□□ 1.29
SLX4Q8IY92 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.11■■□□□ 1.29
SLX4Q8IY92 AL592071.1-201ENST00000611956 408 ntBASIC23.11■■□□□ 1.29
SLX4Q8IY92 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23.11■■□□□ 1.29
SLX4Q8IY92 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLX4Q8IY92 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLX4Q8IY92 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLX4Q8IY92 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLX4Q8IY92 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.11■■□□□ 1.29
SLX4Q8IY92 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLX4Q8IY92 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLX4Q8IY92 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLX4Q8IY92 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLX4Q8IY92 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLX4Q8IY92 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLX4Q8IY92 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
SLX4Q8IY92 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLX4Q8IY92 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.1■■□□□ 1.29
SLX4Q8IY92 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLX4Q8IY92 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLX4Q8IY92 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLX4Q8IY92 IL9RP2-201ENST00000423948 1312 ntBASIC23.1■■□□□ 1.29
SLX4Q8IY92 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.1■■□□□ 1.29
SLX4Q8IY92 KRT18P23-201ENST00000435622 1283 ntBASIC23.1■■□□□ 1.29
SLX4Q8IY92 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.1■■□□□ 1.29
SLX4Q8IY92 SLC25A1P1-201ENST00000528351 927 ntBASIC23.1■■□□□ 1.29
SLX4Q8IY92 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
SLX4Q8IY92 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.1■■□□□ 1.29
SLX4Q8IY92 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SLX4Q8IY92 AF228730.7-201ENST00000641842 219 ntBASIC23.1■■□□□ 1.29
SLX4Q8IY92 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.1■■□□□ 1.29
SLX4Q8IY92 AC099778.1-201ENST00000568593 1911 ntBASIC23.09■■□□□ 1.29
SLX4Q8IY92 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLX4Q8IY92 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLX4Q8IY92 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLX4Q8IY92 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLX4Q8IY92 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLX4Q8IY92 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLX4Q8IY92 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLX4Q8IY92 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLX4Q8IY92 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLX4Q8IY92 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLX4Q8IY92 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLX4Q8IY92 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.08■■□□□ 1.29
SLX4Q8IY92 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.08■■□□□ 1.29
SLX4Q8IY92 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.08■■□□□ 1.29
SLX4Q8IY92 AC090616.6-201ENST00000582640 721 ntBASIC23.08■■□□□ 1.29
SLX4Q8IY92 Z69720.1-201ENST00000601483 472 ntBASIC23.08■■□□□ 1.29
SLX4Q8IY92 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLX4Q8IY92 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLX4Q8IY92 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SLX4Q8IY92 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SLX4Q8IY92 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SLX4Q8IY92 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SLX4Q8IY92 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.08■■□□□ 1.28
SLX4Q8IY92 AP001005.1-201ENST00000571755 1248 ntBASIC23.08■■□□□ 1.28
SLX4Q8IY92 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
SLX4Q8IY92 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.07■■□□□ 1.28
SLX4Q8IY92 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.07■■□□□ 1.28
SLX4Q8IY92 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC23.07■■□□□ 1.28
SLX4Q8IY92 NSUN5P1-202ENST00000421140 1535 ntBASIC23.07■■□□□ 1.28
SLX4Q8IY92 NSUN5P2-203ENST00000457352 1529 ntBASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms