Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 AC010203.1-204ENST00000548782 407 ntBASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 AL512604.3-201ENST00000569583 964 ntBASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 AC092865.7-201ENST00000641832 219 ntBASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRTM4Q86VH4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 KRT18P57-201ENST00000443599 1254 ntBASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 AC008622.2-201ENST00000617006 1229 ntBASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRTM4Q86VH4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM4Q86VH4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRTM4Q86VH4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRTM4Q86VH4 RN7SL850P-201ENST00000579959 291 ntBASIC18.58■□□□□ 0.56
LRRTM4Q86VH4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LRRTM4Q86VH4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRTM4Q86VH4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LRRTM4Q86VH4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRTM4Q86VH4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LRRTM4Q86VH4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRTM4Q86VH4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRTM4Q86VH4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRTM4Q86VH4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 AC073508.3-201ENST00000619697 1419 ntBASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM4Q86VH4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms