Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 NOC2LP2-201ENST00000407594 1944 ntBASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 AL133373.2-201ENST00000623187 2828 ntBASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 NCF1B-203ENST00000435988 1254 ntBASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 SOX15-203ENST00000570788 1093 ntBASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.92■□□□□ 0.46
RUNDC3AQ59EK9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 AC073592.3-201ENST00000625118 1834 ntBASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 TSPY23P-201ENST00000440136 739 ntBASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 AL160286.2-201ENST00000567150 934 ntBASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RUNDC3AQ59EK9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 AC083880.1-201ENST00000608266 535 ntBASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.9■□□□□ 0.46
RUNDC3AQ59EK9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RUNDC3AQ59EK9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RUNDC3AQ59EK9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.89■□□□□ 0.46
RUNDC3AQ59EK9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.89■□□□□ 0.45
RUNDC3AQ59EK9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms